Experiment ID: 1826

Field Description
nameimpact of diabetes on the gut and salivary iga microbiomes (7671898) - gpt-5
proj_id7671898
sraprjna662100
date_of_upload15/11/2025 15:40
doi10.1128/iai.00301-20
modelgpt-5
dbbact_id841
dbbact_linkhttps://dbbact.org/exp_info/841
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
state of texas0.181818
type 2 diabetes mellitus0.166667
mouth mucosa0.157303
LOWER IN oral cavity0.111111
LOWER IN mouth mucosa0.105263
oral cavity0.092105
LOWER IN type 2 diabetes mellitus0.086957
colon0.078740
LOWER IN colon0.066667
LOWER IN saliva0.062500
LOWER IN feces0.047619
human adult stage0.045455
saliva0.029106
control0.008658
LOWER IN control0.008403
united states of america0.006645
homo sapiens0.005168
feces0.004562
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN type 2 diabetes mellitus0.200000
LOWER IN oral cavity0.166667
type 2 diabetes mellitus0.166667
LOWER IN mouth mucosa0.142857
state of texas0.100000
mouth mucosa0.090909
LOWER IN colon0.055556
oral cavity0.050000
LOWER IN saliva0.050000
colon0.043478
LOWER IN feces0.033333
human adult stage0.023256
saliva0.014925
LOWER IN control0.004545
control0.004444
united states of america0.003333
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
human adult stage1.000000
homo sapiens1.000000
state of texas1.000000
united states of america1.000000
city of houston1.000000
starr county1.000000
mouth mucosa0.583333
oral cavity0.583333
saliva0.583333
colon0.416667
feces0.416667
presort excluded0.416667
igm-negative0.277778
iga-coated0.277778
iga-uncoated0.277778
presort0.250000
iga-coated or iga-uncoated0.250000
prediabetic0.166667
diabetic0.166667
prediabetes syndrome0.166667
type 2 diabetes mellitus0.166667
control0.166667
LOWER IN iga-uncoated0.111111
LOWER IN iga-coated0.111111
LOWER IN igm-negative0.111111
LOWER IN colon0.083333
LOWER IN feces0.083333
LOWER IN mouth mucosa0.083333
LOWER IN oral cavity0.083333
LOWER IN saliva0.083333
LOWER IN presort excluded0.083333
LOWER IN presort0.083333
LOWER IN prediabetic0.055556
LOWER IN control0.055556
LOWER IN prediabetes syndrome0.055556
LOWER IN type 2 diabetes mellitus0.055556
LOWER IN diabetic0.055556
LOWER IN iga-coated or iga-uncoated0.027778
Exp. ID User ID Description Date Region Sequences Status Flag
1826gpt-5Presort vs IgA-coated (salivary): enrichment of IgA-targeted taxa ( high in igm-negative presort excluded iga-coated compared to presort in human adult stage homo sapiens state of texas united states of america oral cavity city of houston mouth mucosa starr county saliva )2025-11-15v41 / 1pendingNo
1826gpt-5Salivary IgA-coated vs IgA-uncoated fractions (immune targeting within oral microbiome) ( high in iga-uncoated compared to iga-coated in human adult stage homo sapiens state of texas united states of america igm-negative oral cavity presort excluded city of houston mouth mucosa starr county saliva )2025-11-15v41 / 5pendingNo
1826gpt-5Glycemic status in saliva: diabetic vs normoglycemic (all IgA sorts) ( high in control compared to prediabetic diabetic prediabetes syndrome iga-coated or iga-uncoated type 2 diabetes mellitus in human adult stage homo sapiens state of texas united states of america oral cavity city of houston mouth mucosa starr county saliva )2025-11-15v41 / 6pendingNo
1826gpt-5Presort vs IgA-uncoated (salivary): depletion of untargeted taxa ( high in igm-negative presort excluded iga-uncoated compared to presort in human adult stage homo sapiens state of texas united states of america oral cavity city of houston mouth mucosa starr county saliva )2025-11-15v41 / 6pendingNo
1826gpt-5Presort vs IgA-coated (fecal): enrichment of IgA-targeted taxa ( high in presort excluded iga-uncoated iga-coated compared to presort in human adult stage homo sapiens state of texas united states of america city of houston colon starr county feces )2025-11-15v41 / 7pendingNo
1826gpt-5Glycemic status in saliva: diabetic vs normoglycemic (all IgA sorts) ( high in prediabetic diabetic prediabetes syndrome iga-coated or iga-uncoated type 2 diabetes mellitus compared to control in human adult stage homo sapiens state of texas united states of america oral cavity city of houston mouth mucosa starr county saliva )2025-11-15v41 / 9pendingNo
1826gpt-5Salivary IgA-coated vs IgA-uncoated fractions (immune targeting within oral microbiome) ( high in iga-coated compared to iga-uncoated in human adult stage homo sapiens state of texas united states of america igm-negative oral cavity presort excluded city of houston mouth mucosa starr county saliva )2025-11-15v41 / 10pendingNo
1826gpt-5Glycemic status in feces: diabetic vs normoglycemic (all IgA sorts) ( high in prediabetic control prediabetes syndrome compared to type 2 diabetes mellitus diabetic in human adult stage homo sapiens state of texas united states of america iga-coated or iga-uncoated city of houston colon starr county feces )2025-11-15v41 / 11pendingNo
1826gpt-5Salivary microbiome: IgA-coated fraction (dominant human adult stage, homo sapiens, state of texas, united states of america, igm-negative, oral cavity, presort excluded, iga-coated, city of houston, mouth mucosa, starr county, saliva)2025-11-15v41 / 17pendingNo
1826gpt-5Salivary microbiome: IgA-uncoated fraction (dominant human adult stage, homo sapiens, iga-uncoated, state of texas, united states of america, igm-negative, oral cavity, presort excluded, city of houston, mouth mucosa, starr county, saliva)2025-11-15v41 / 17pendingNo
1826gpt-5Diabetic salivary samples (all IgA sorts) + Prediabetic salivary samples (all IgA sorts) (dominant human adult stage, homo sapiens, prediabetic, diabetic, prediabetes syndrome, state of texas, united states of america, iga-coated or iga-uncoated, oral cavity, type 2 diabetes mellitus, city of houston, mouth mucosa, starr county, saliva)2025-11-15v41 / 18pendingNo
1826gpt-5Salivary microbiome: presort (overall community) (dominant human adult stage, homo sapiens, state of texas, united states of america, presort, oral cavity, city of houston, mouth mucosa, starr county, saliva)2025-11-15v41 / 18pendingNo
1826gpt-5Normoglycemic salivary samples (all IgA sorts) (dominant human adult stage, homo sapiens, state of texas, united states of america, control, oral cavity, city of houston, mouth mucosa, starr county, saliva)2025-11-15v41 / 19pendingNo
1826gpt-5Fecal microbiome: IgA-uncoated fraction + Fecal microbiome: IgA-coated fraction (dominant human adult stage, homo sapiens, iga-uncoated, state of texas, united states of america, presort excluded, iga-coated, city of houston, colon, starr county, feces)2025-11-15v41 / 21pendingNo
1826gpt-5Prediabetic fecal samples (all IgA sorts) + Normoglycemic fecal samples (all IgA sorts) (dominant human adult stage, homo sapiens, prediabetic, prediabetes syndrome, state of texas, united states of america, control, iga-coated or iga-uncoated, city of houston, colon, starr county, feces)2025-11-15v41 / 22pendingNo
1826gpt-5Diabetic fecal samples (all IgA sorts) (dominant human adult stage, homo sapiens, diabetic, state of texas, united states of america, iga-coated or iga-uncoated, type 2 diabetes mellitus, city of houston, colon, starr county, feces)2025-11-15v41 / 22pendingNo
1826gpt-5Fecal microbiome: presort (overall community) (dominant human adult stage, homo sapiens, state of texas, united states of america, presort, city of houston, colon, starr county, feces)2025-11-15v41 / 23pendingNo
1826gpt-5Presort vs IgA-coated (salivary): enrichment of IgA-targeted taxa ( high in presort compared to igm-negative presort excluded iga-coated in human adult stage homo sapiens state of texas united states of america oral cavity city of houston mouth mucosa starr county saliva )2025-11-15v41 / 41pendingNo
1826gpt-5Glycemic status in feces: diabetic vs normoglycemic (all IgA sorts) ( high in type 2 diabetes mellitus diabetic compared to prediabetic control prediabetes syndrome in human adult stage homo sapiens state of texas united states of america iga-coated or iga-uncoated city of houston colon starr county feces )2025-11-15v41 / 42pendingNo
1826gpt-5Salivary microbiome: IgA-uncoated fraction (common human adult stage, homo sapiens, iga-uncoated, state of texas, united states of america, igm-negative, oral cavity, presort excluded, city of houston, mouth mucosa, starr county, saliva)2025-11-15v41 / 44pendingNo
1826gpt-5Fecal microbiome: IgA-uncoated fraction + Fecal microbiome: IgA-coated fraction (common human adult stage, homo sapiens, iga-uncoated, state of texas, united states of america, presort excluded, iga-coated, city of houston, colon, starr county, feces)2025-11-15v41 / 48pendingNo
1826gpt-5Prediabetic fecal samples (all IgA sorts) + Normoglycemic fecal samples (all IgA sorts) (common human adult stage, homo sapiens, prediabetic, prediabetes syndrome, state of texas, united states of america, control, iga-coated or iga-uncoated, city of houston, colon, starr county, feces)2025-11-15v41 / 62pendingNo
1826gpt-5Presort vs IgA-coated (fecal): enrichment of IgA-targeted taxa ( high in presort compared to presort excluded iga-uncoated iga-coated in human adult stage homo sapiens state of texas united states of america city of houston colon starr county feces )2025-11-15v41 / 72pendingNo
1826gpt-5Diabetic fecal samples (all IgA sorts) (common human adult stage, homo sapiens, diabetic, state of texas, united states of america, iga-coated or iga-uncoated, type 2 diabetes mellitus, city of houston, colon, starr county, feces)2025-11-15v41 / 72pendingNo
1826gpt-5Normoglycemic salivary samples (all IgA sorts) (common human adult stage, homo sapiens, state of texas, united states of america, control, oral cavity, city of houston, mouth mucosa, starr county, saliva)2025-11-15v41 / 79pendingNo
1826gpt-5Salivary microbiome: IgA-coated fraction (common human adult stage, homo sapiens, state of texas, united states of america, igm-negative, oral cavity, presort excluded, iga-coated, city of houston, mouth mucosa, starr county, saliva)2025-11-15v41 / 83pendingNo
1826gpt-5Fecal microbiome: presort (overall community) (common human adult stage, homo sapiens, state of texas, united states of america, presort, city of houston, colon, starr county, feces)2025-11-15v41 / 86pendingNo
1826gpt-5Diabetic salivary samples (all IgA sorts) + Prediabetic salivary samples (all IgA sorts) (common human adult stage, homo sapiens, prediabetic, diabetic, prediabetes syndrome, state of texas, united states of america, iga-coated or iga-uncoated, oral cavity, type 2 diabetes mellitus, city of houston, mouth mucosa, starr county, saliva)2025-11-15v41 / 93pendingNo
1826gpt-5Salivary microbiome: presort (overall community) (common human adult stage, homo sapiens, state of texas, united states of america, presort, oral cavity, city of houston, mouth mucosa, starr county, saliva)2025-11-15v41 / 130pendingNo
1826gpt-5Presort vs IgA-uncoated (salivary): depletion of untargeted taxa ( high in presort compared to igm-negative presort excluded iga-uncoated in human adult stage homo sapiens state of texas united states of america oral cavity city of houston mouth mucosa starr county saliva )2025-11-15v41 / 137pendingNo
1826gpt-5Body site effect on IgA-coated microbiota: feces vs saliva ( high in colon iga-uncoated feces compared to igm-negative mouth mucosa oral cavity saliva in human adult stage homo sapiens state of texas united states of america presort excluded iga-coated city of houston starr county )2025-11-15v41 / 162pendingNo
1826gpt-5Body site effect on IgA-uncoated microbiota: feces vs saliva ( high in colon iga-coated feces compared to igm-negative mouth mucosa oral cavity saliva in human adult stage homo sapiens iga-uncoated state of texas united states of america presort excluded city of houston starr county )2025-11-15v41 / 168pendingNo
1826gpt-5Body site effect on IgA-uncoated microbiota: feces vs saliva ( high in igm-negative mouth mucosa oral cavity saliva compared to colon iga-coated feces in human adult stage homo sapiens iga-uncoated state of texas united states of america presort excluded city of houston starr county )2025-11-15v41 / 197pendingNo
1826gpt-5Body site effect on IgA-coated microbiota: feces vs saliva ( high in igm-negative mouth mucosa oral cavity saliva compared to colon iga-uncoated feces in human adult stage homo sapiens state of texas united states of america presort excluded iga-coated city of houston starr county )2025-11-15v41 / 259pendingNo
1826gpt-5Body site effect on overall communities: fecal vs salivary presort ( high in colon feces compared to mouth mucosa oral cavity saliva in human adult stage homo sapiens state of texas united states of america presort city of houston starr county )2025-11-15v41 / 264pendingNo
1826gpt-5Body site effect on overall communities: fecal vs salivary presort ( high in mouth mucosa oral cavity saliva compared to colon feces in human adult stage homo sapiens state of texas united states of america presort city of houston starr county )2025-11-15v41 / 351pendingNo

Problems / suggestions? Please visit the dbBact forum