Experiment ID: 1823

Field Description
namecftr dysregulation drives active selection of the gut microbiome (6994172) - gpt-5
modelgpt-5
proj_id6994172
sraprjeb32648
date_of_upload15/11/2025 15:36
doi10.1371/journal.ppat.1008251
dbbact_id619
dbbact_linkhttps://dbbact.org/exp_info/619
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
seattle0.666667
small intestine0.285714
cystic fibrosis0.250000
LOWER IN cystic fibrosis0.250000
mus musculus0.027027
research facility0.010417
LOWER IN control0.008850
control0.008811
united states of america0.006645
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
seattle0.500000
LOWER IN cystic fibrosis0.500000
small intestine0.166667
cystic fibrosis0.166667
mus musculus0.013699
research facility0.005236
LOWER IN control0.004545
control0.004444
united states of america0.003333
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
spleen1.000000
small intestine1.000000
united states of america1.000000
mesenteric lymph node1.000000
city of seattle1.000000
mus musculus1.000000
germ-free derived1.000000
feces1.000000
research facility1.000000
seattle1.000000
post fecal microbiota transplantation1.000000
cystic fibrosis0.500000
cftr s489x mutation0.500000
control0.500000
LOWER IN control0.166667
LOWER IN cystic fibrosis0.166667
LOWER IN cftr s489x mutation0.166667
Number of experiments associating the term to the sequence
TermScore
spleen1.000000
small intestine1.000000
united states of america1.000000
mesenteric lymph node1.000000
city of seattle1.000000
mus musculus1.000000
cystic fibrosis1.000000
germ-free derived1.000000
feces1.000000
research facility1.000000
seattle1.000000
post fecal microbiota transplantation1.000000
cftr s489x mutation1.000000
control1.000000
LOWER IN control1.000000
LOWER IN cystic fibrosis1.000000
LOWER IN cftr s489x mutation1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1823gpt-5Impact of host genotype on post-FMT gut microbiome (CF vs non-CF mice) ( high in control compared to cystic fibrosis cftr s489x mutation in spleen small intestine united states of america mesenteric lymph node city of seattle mus musculus germ-free derived feces research facility seattle post fecal microbiota transplantation )2025-11-15v31 / 1pendingNo
1823gpt-5CF mouse gut samples (post-FMT, gut microbiome) (dominant spleen, small intestine, united states of america, mesenteric lymph node, city of seattle, mus musculus, cystic fibrosis, germ-free derived, feces, research facility, seattle, post fecal microbiota transplantation, cftr s489x mutation)2025-11-15v31 / 20pendingNo
1823gpt-5Non-CF mouse gut samples (post-FMT, gut microbiome) (dominant spleen, small intestine, united states of america, mesenteric lymph node, city of seattle, mus musculus, control, germ-free derived, feces, research facility, seattle, post fecal microbiota transplantation)2025-11-15v31 / 22pendingNo
1823gpt-5Impact of host genotype on post-FMT gut microbiome (CF vs non-CF mice) ( high in cystic fibrosis cftr s489x mutation compared to control in spleen small intestine united states of america mesenteric lymph node city of seattle mus musculus germ-free derived feces research facility seattle post fecal microbiota transplantation )2025-11-15v31 / 36pendingNo
1823gpt-5Non-CF mouse gut samples (post-FMT, gut microbiome) (common spleen, small intestine, united states of america, mesenteric lymph node, city of seattle, mus musculus, control, germ-free derived, feces, research facility, seattle, post fecal microbiota transplantation)2025-11-15v31 / 42pendingNo
1823gpt-5CF mouse gut samples (post-FMT, gut microbiome) (common spleen, small intestine, united states of america, mesenteric lymph node, city of seattle, mus musculus, cystic fibrosis, germ-free derived, feces, research facility, seattle, post fecal microbiota transplantation, cftr s489x mutation)2025-11-15v31 / 64pendingNo

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