Experiment ID: 1819

Field Description
namedefining dysbiosis in patients with urolithiasis (6443657) - gpt-5
proj_id6443657
srasrp140641
date_of_upload15/11/2025 15:33
doi10.1038/s41598-019-41977-6
modelgpt-5
dbbact_id516
dbbact_linkhttps://dbbact.org/exp_info/516
needs_manual_reviewtrue

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN urine0.500000
nephrolithiasis0.500000
LOWER IN alimentary part of gastrointestinal system0.500000
alimentary part of gastrointestinal system0.333333
urine0.200000
LOWER IN feces0.033333
human adult stage0.023256
control0.004444
united states of america0.003333
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
patient1.000000
nephrolithiasis1.000000
human adult stage1.000000
homo sapiens1.000000
city of cleveland1.000000
control1.000000
feces0.500000
alimentary part of gastrointestinal system0.500000
urine0.500000
renal system0.500000
LOWER IN urine0.166667
LOWER IN renal system0.166667
LOWER IN feces0.166667
LOWER IN alimentary part of gastrointestinal system0.166667
Number of experiments associating the term to the sequence
TermScore
feces1.000000
alimentary part of gastrointestinal system1.000000
LOWER IN urine1.000000
LOWER IN renal system1.000000
united states of america1.000000
patient1.000000
nephrolithiasis1.000000
human adult stage1.000000
homo sapiens1.000000
city of cleveland1.000000
control1.000000
urine1.000000
renal system1.000000
LOWER IN feces1.000000
LOWER IN alimentary part of gastrointestinal system1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1819gpt-5Urine microbiome from healthy individuals + Urine microbiome from USD patients (common renal system, united states of america, patient, nephrolithiasis, human adult stage, homo sapiens, city of cleveland, control, urine)2025-11-15v41 / 8pendingNo
1819gpt-5Urine microbiome from healthy individuals + Urine microbiome from USD patients (dominant renal system, united states of america, patient, nephrolithiasis, human adult stage, homo sapiens, city of cleveland, control, urine)2025-11-15v41 / 13pendingNo
1819gpt-5Stool microbiome from healthy individuals + Stool microbiome from USD patients (dominant feces, alimentary part of gastrointestinal system, united states of america, patient, nephrolithiasis, human adult stage, homo sapiens, city of cleveland, control)2025-11-15v41 / 19pendingNo
1819gpt-5Stool microbiome from healthy individuals + Stool microbiome from USD patients (common feces, alimentary part of gastrointestinal system, united states of america, patient, nephrolithiasis, human adult stage, homo sapiens, city of cleveland, control)2025-11-15v41 / 77pendingNo
1819gpt-5Body site differences in USD: urine vs stool ( high in urine renal system compared to feces alimentary part of gastrointestinal system in united states of america patient nephrolithiasis human adult stage homo sapiens city of cleveland control )2025-11-15v41 / 102pendingNo
1819gpt-5Body site differences in USD: urine vs stool ( high in feces alimentary part of gastrointestinal system compared to urine renal system in united states of america patient nephrolithiasis human adult stage homo sapiens city of cleveland control )2025-11-15v41 / 752pendingNo

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