Experiment ID: 1795

Field Description
namelongitudinal analysis of the intestinal microbiota in persistently stunted young children in south india (4881907) - gpt-5
proj_id4881907
srasrp066115
date_of_upload15/11/2025 14:55
doi10.1371/journal.pone.0155405
modelgpt-5
dbbact_id45
dbbact_linkhttps://dbbact.org/exp_info/45
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
infant stage0.500000
amoxicillin0.400000
3-month-old human stage0.232558
child stage0.200000
12-month-old human stage0.187500
india0.153846
diarrhea0.153846
LOWER IN 3-month-old human stage0.142857
LOWER IN 12-month-old human stage0.142857
intestine0.062500
control0.008734
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
amoxicillin1.000000
infant stage0.333333
LOWER IN 3-month-old human stage0.166667
child stage0.166667
LOWER IN 12-month-old human stage0.166667
3-month-old human stage0.142857
12-month-old human stage0.125000
diarrhea0.111111
india0.083333
intestine0.032258
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
intestine1.000000
infant stage1.000000
urban slum dwelling1.000000
tamil nadu state1.000000
vellore1.000000
india1.000000
feces1.000000
homo sapiens1.000000
mixed cases and controls0.750000
3-month-old human stage0.625000
12-month-old human stage0.375000
control0.250000
low birth weight0.250000
amoxicillin0.250000
child stage0.250000
normal birth weight0.250000
diarrhea0.250000
norfloxacin0.250000
LOWER IN 3-month-old human stage0.125000
LOWER IN 12-month-old human stage0.125000
Number of experiments associating the term to the sequence
TermScore
12-month-old human stage1.000000
LOWER IN 3-month-old human stage1.000000
intestine1.000000
infant stage1.000000
mixed cases and controls1.000000
urban slum dwelling1.000000
tamil nadu state1.000000
vellore1.000000
india1.000000
feces1.000000
homo sapiens1.000000
control1.000000
3-month-old human stage1.000000
low birth weight1.000000
amoxicillin1.000000
child stage1.000000
normal birth weight1.000000
diarrhea1.000000
norfloxacin1.000000
LOWER IN 12-month-old human stage1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1795gpt-5Microbiota maturation from 3 to 12 months (all children) ( high in 3-month-old human stage compared to 12-month-old human stage in intestine infant stage mixed cases and controls urban slum dwelling tamil nadu state vellore india feces homo sapiens )2025-11-15v41 / 4pendingNo
1795gpt-53-month timepoint samples (all children), fecal microbiota (common intestine, 3-month-old human stage, infant stage, mixed cases and controls, urban slum dwelling, tamil nadu state, vellore, india, feces, homo sapiens)2025-11-15v41 / 13pendingNo
1795gpt-53-month timepoint samples (all children), fecal microbiota (dominant intestine, 3-month-old human stage, infant stage, mixed cases and controls, urban slum dwelling, tamil nadu state, vellore, india, feces, homo sapiens)2025-11-15v41 / 13pendingNo
1795gpt-512-month timepoint samples (all children), fecal microbiota (dominant intestine, infant stage, mixed cases and controls, urban slum dwelling, 12-month-old human stage, tamil nadu state, vellore, india, feces, homo sapiens)2025-11-15v41 / 17pendingNo
1795gpt-5Persistently stunted children (cases), fecal microbiota + Non-stunted children (controls), fecal microbiota (dominant control, intestine, 3-month-old human stage, low birth weight, infant stage, amoxicillin, child stage, normal birth weight, urban slum dwelling, diarrhea, tamil nadu state, vellore, india, feces, norfloxacin, homo sapiens)2025-11-15v41 / 19pendingNo
1795gpt-5Persistently stunted children (cases), fecal microbiota + Non-stunted children (controls), fecal microbiota (common control, intestine, 3-month-old human stage, low birth weight, infant stage, amoxicillin, child stage, normal birth weight, urban slum dwelling, diarrhea, tamil nadu state, vellore, india, feces, norfloxacin, homo sapiens)2025-11-15v41 / 27pendingNo
1795gpt-512-month timepoint samples (all children), fecal microbiota (common intestine, infant stage, mixed cases and controls, urban slum dwelling, 12-month-old human stage, tamil nadu state, vellore, india, feces, homo sapiens)2025-11-15v41 / 38pendingNo
1795gpt-5Microbiota maturation from 3 to 12 months (all children) ( high in 12-month-old human stage compared to 3-month-old human stage in intestine infant stage mixed cases and controls urban slum dwelling tamil nadu state vellore india feces homo sapiens )2025-11-15v41 / 41pendingNo

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