Experiment ID: 1783

Field Description
namecharacterization of the juvenile green turtle (chelonia mydas) microbiome throughout an ontogenetic shift from pelagic to neritic habitats (5426784) - gpt-5
proj_id5426784
srasrp080996
date_of_upload15/11/2025 14:19
doi10.1371/journal.pone.0177642
modelgpt-5
dbbact_id288
dbbact_linkhttps://dbbact.org/exp_info/288
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
chelonia mydas0.500000
sea grass bed0.500000
juvenile0.500000
gulf of mexico0.500000
juvenile stage0.400000
marine water body0.400000
state of louisiana0.400000
offshore0.400000
LOWER IN state of louisiana0.285714
LOWER IN gulf of mexico0.285714
LOWER IN sea grass bed0.285714
juvenile organism0.250000
LOWER IN marine water body0.250000
LOWER IN offshore0.250000
cloaca0.181818
LOWER IN 0.181818
LOWER IN feces0.055556
united states of america0.006645
feces0.004566
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN state of louisiana1.000000
LOWER IN gulf of mexico1.000000
LOWER IN sea grass bed1.000000
sea grass bed0.500000
gulf of mexico0.500000
LOWER IN marine water body0.500000
LOWER IN offshore0.500000
chelonia mydas0.333333
juvenile0.333333
marine water body0.333333
state of louisiana0.333333
offshore0.333333
juvenile stage0.250000
LOWER IN 0.200000
juvenile organism0.142857
cloaca0.100000
LOWER IN feces0.033333
united states of america0.003333
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
juvenile organism1.000000
juvenile stage1.000000
chelonia mydas1.000000
cloaca1.000000
united states of america1.000000
juvenile1.000000
saint andrew bay0.500000
sea grass bed0.500000
saint joseph bay0.500000
santa rosa island0.500000
feces0.500000
marine water body0.500000
state of louisiana0.500000
offshore0.500000
gulf of mexico0.500000
LOWER IN feces0.166667
LOWER IN marine water body0.166667
LOWER IN state of louisiana0.166667
LOWER IN offshore0.166667
LOWER IN gulf of mexico0.166667
LOWER IN saint andrew bay0.166667
LOWER IN sea grass bed0.166667
LOWER IN saint joseph bay0.166667
LOWER IN santa rosa island0.166667
LOWER IN 0.166667
Number of experiments associating the term to the sequence
TermScore
juvenile organism1.000000
juvenile stage1.000000
chelonia mydas1.000000
cloaca1.000000
saint andrew bay1.000000
sea grass bed1.000000
united states of america1.000000
saint joseph bay1.000000
juvenile1.000000
santa rosa island1.000000
feces1.000000
marine water body1.000000
state of louisiana1.000000
offshore1.000000
gulf of mexico1.000000
LOWER IN feces1.000000
LOWER IN marine water body1.000000
LOWER IN state of louisiana1.000000
LOWER IN offshore1.000000
LOWER IN gulf of mexico1.000000
LOWER IN saint andrew bay1.000000
LOWER IN sea grass bed1.000000
LOWER IN saint joseph bay1.000000
LOWER IN santa rosa island1.000000
LOWER IN 1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1783gpt-5Neritic juvenile turtles (Northern Florida; Sept 2015) - Cloacal swabs (dominant juvenile organism, juvenile stage, chelonia mydas, cloaca, saint andrew bay, sea grass bed, united states of america, saint joseph bay, juvenile, santa rosa island, )2025-11-15v41 / 18pendingNo
1783gpt-5Pelagic juvenile turtles (Louisiana, offshore; July 2015) - All samples + Pelagic juvenile turtles (Louisiana, offshore; July 2015) - Cloacal swabs (dominant juvenile organism, juvenile stage, feces, chelonia mydas, marine water body, cloaca, united states of america, state of louisiana, offshore, juvenile, gulf of mexico)2025-11-15v41 / 21pendingNo
1783gpt-5Cloacal microbiome: pelagic vs neritic juvenile turtles (habitat/region contrast, same season) ( high in feces marine water body state of louisiana offshore gulf of mexico compared to saint andrew bay sea grass bed saint joseph bay santa rosa island in juvenile organism juvenile stage chelonia mydas cloaca united states of america juvenile )2025-11-15v41 / 43pendingNo
1783gpt-5Cloacal microbiome: pelagic vs neritic juvenile turtles (habitat/region contrast, same season) ( high in saint andrew bay sea grass bed saint joseph bay santa rosa island compared to feces marine water body state of louisiana offshore gulf of mexico in juvenile organism juvenile stage chelonia mydas cloaca united states of america juvenile )2025-11-15v41 / 65pendingNo
1783gpt-5Pelagic juvenile turtles (Louisiana, offshore; July 2015) - All samples + Pelagic juvenile turtles (Louisiana, offshore; July 2015) - Cloacal swabs (common juvenile organism, juvenile stage, feces, chelonia mydas, marine water body, cloaca, united states of america, state of louisiana, offshore, juvenile, gulf of mexico)2025-11-15v41 / 87pendingNo
1783gpt-5Neritic juvenile turtles (Northern Florida; Sept 2015) - Cloacal swabs (common juvenile organism, juvenile stage, chelonia mydas, cloaca, saint andrew bay, sea grass bed, united states of america, saint joseph bay, juvenile, santa rosa island, )2025-11-15v41 / 99pendingNo

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