Experiment ID: 1782

Field Description
namedifferences in gut metabolites and microbial composition and functions between egyptian and u.s. children are consistent with their diets (5296411) - gpt-5
proj_id5296411
sraprjna314988
date_of_upload15/11/2025 14:18
doi10.1128/msystems.00169-16
modelgpt-5
dbbact_id62
dbbact_linkhttps://dbbact.org/exp_info/62
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
urban biome0.400000
western diet0.333333
egypt0.250000
LOWER IN egypt0.250000
LOWER IN western diet0.200000
adolescent stage0.142857
male organism0.111111
LOWER IN united states of america0.111111
united states of america0.006623
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN egypt0.500000
urban biome0.250000
western diet0.250000
LOWER IN western diet0.250000
egypt0.166667
LOWER IN united states of america0.083333
adolescent stage0.076923
male organism0.058824
united states of america0.003333
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
distal gut1.000000
feces1.000000
male organism1.000000
urban biome1.000000
adolescent stage1.000000
egypt0.500000
egkhlt cohort0.500000
mediterranean diet0.500000
giza governorate0.500000
united states of america0.500000
western diet0.500000
dayton0.500000
LOWER IN united states of america0.166667
LOWER IN western diet0.166667
LOWER IN dayton0.166667
LOWER IN egypt0.166667
LOWER IN giza governorate0.166667
LOWER IN egkhlt cohort0.166667
LOWER IN mediterranean diet0.166667
Number of experiments associating the term to the sequence
TermScore
homo sapiens1.000000
distal gut1.000000
egypt1.000000
egkhlt cohort1.000000
mediterranean diet1.000000
giza governorate1.000000
feces1.000000
male organism1.000000
urban biome1.000000
adolescent stage1.000000
united states of america1.000000
western diet1.000000
dayton1.000000
LOWER IN united states of america1.000000
LOWER IN western diet1.000000
LOWER IN dayton1.000000
LOWER IN egypt1.000000
LOWER IN giza governorate1.000000
LOWER IN egkhlt cohort1.000000
LOWER IN mediterranean diet1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1782gpt-5Egyptian teenagers (fecal gut microbiota) (dominant homo sapiens, distal gut, egypt, egkhlt cohort, mediterranean diet, giza governorate, feces, male organism, urban biome, adolescent stage)2025-11-15v41 / 19pendingNo
1782gpt-5U.S. teenagers (fecal gut microbiota) (dominant homo sapiens, distal gut, united states of america, western diet, male organism, feces, dayton, urban biome, adolescent stage)2025-11-15v41 / 26pendingNo
1782gpt-5Geography-driven differences in teenage gut microbiota (Egypt vs USA) ( high in united states of america western diet dayton compared to egypt giza governorate egkhlt cohort mediterranean diet in homo sapiens distal gut feces male organism urban biome adolescent stage )2025-11-15v41 / 111pendingNo
1782gpt-5Geography-driven differences in teenage gut microbiota (Egypt vs USA) ( high in egypt giza governorate egkhlt cohort mediterranean diet compared to united states of america western diet dayton in homo sapiens distal gut feces male organism urban biome adolescent stage )2025-11-15v41 / 149pendingNo
1782gpt-5U.S. teenagers (fecal gut microbiota) (common homo sapiens, distal gut, united states of america, western diet, male organism, feces, dayton, urban biome, adolescent stage)2025-11-15v41 / 295pendingNo
1782gpt-5Egyptian teenagers (fecal gut microbiota) (common homo sapiens, distal gut, egypt, egkhlt cohort, mediterranean diet, giza governorate, feces, male organism, urban biome, adolescent stage)2025-11-15v41 / 316pendingNo

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