Experiment ID: 1765

Field Description
namecharacterization of the juvenile green turtle (chelonia mydas) microbiome throughout an ontogenetic shift from pelagic to neritic habitats (5426784) - gpt-5
proj_id5426784
srasrp080996
date_of_upload12/11/2025 14:54
doi10.1371/journal.pone.0177642
modelgpt-5
dbbact_id288
dbbact_linkhttps://dbbact.org/exp_info/288
needs_manual_reviewtrue

Annotations for experiment:

term enrichment score
TermScore
gulf of mexico0.560000
juvenile0.500000
chelonia mydas0.500000
marine water body0.437500
state of louisiana0.437500
offshore0.437500
sea grass bed0.421053
juvenile stage0.400000
LOWER IN state of louisiana0.307692
LOWER IN gulf of mexico0.307692
LOWER IN sea grass bed0.307692
LOWER IN marine water body0.266667
LOWER IN offshore0.266667
juvenile organism0.250000
LOWER IN 0.190476
cloaca0.181818
LOWER IN feces0.048780
united states of america0.006645
feces0.004558
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN state of louisiana1.000000
LOWER IN gulf of mexico1.000000
LOWER IN sea grass bed1.000000
sea grass bed0.500000
gulf of mexico0.500000
LOWER IN marine water body0.500000
LOWER IN offshore0.500000
juvenile0.333333
chelonia mydas0.333333
marine water body0.333333
state of louisiana0.333333
offshore0.333333
juvenile stage0.250000
LOWER IN 0.200000
juvenile organism0.142857
cloaca0.100000
LOWER IN feces0.033333
united states of america0.003333
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
juvenile organism1.000000
cloaca1.000000
juvenile1.000000
united states of america1.000000
chelonia mydas1.000000
juvenile stage1.000000
marine water body0.636364
state of louisiana0.636364
gulf of mexico0.636364
offshore0.636364
santa rosa island0.363636
saint andrew bay0.363636
saint joseph bay0.363636
sea grass bed0.363636
feces0.363636
LOWER IN marine water body0.181818
LOWER IN state of louisiana0.181818
LOWER IN gulf of mexico0.181818
LOWER IN offshore0.181818
LOWER IN saint andrew bay0.181818
LOWER IN 0.181818
LOWER IN saint joseph bay0.181818
LOWER IN sea grass bed0.181818
LOWER IN santa rosa island0.181818
LOWER IN feces0.090909
Number of experiments associating the term to the sequence
TermScore
santa rosa island1.000000
saint andrew bay1.000000
juvenile organism1.000000
cloaca1.000000
saint joseph bay1.000000
juvenile1.000000
united states of america1.000000
chelonia mydas1.000000
sea grass bed1.000000
juvenile stage1.000000
feces1.000000
marine water body1.000000
state of louisiana1.000000
gulf of mexico1.000000
offshore1.000000
LOWER IN feces1.000000
LOWER IN marine water body1.000000
LOWER IN state of louisiana1.000000
LOWER IN gulf of mexico1.000000
LOWER IN offshore1.000000
LOWER IN saint andrew bay1.000000
LOWER IN 1.000000
LOWER IN saint joseph bay1.000000
LOWER IN sea grass bed1.000000
LOWER IN santa rosa island1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1765gpt-5Neritic juvenile turtles (Northern Florida; Sept 2015) - Cloacal swabs (dominant santa rosa island, , saint andrew bay, juvenile organism, cloaca, saint joseph bay, juvenile, united states of america, chelonia mydas, sea grass bed, juvenile stage)2025-11-12v41 / 18pendingNo
1765gpt-5Pelagic juvenile turtles (Louisiana, offshore; July 2015) - All samples (dominant juvenile organism, feces, marine water body, cloaca, state of louisiana, juvenile, gulf of mexico, united states of america, chelonia mydas, juvenile stage, offshore)2025-11-12v41 / 21pendingNo
1765gpt-5Pelagic juvenile turtles (Louisiana, offshore; July 2015) - Cloacal swabs (dominant juvenile organism, marine water body, cloaca, state of louisiana, juvenile, gulf of mexico, united states of america, chelonia mydas, juvenile stage, offshore)2025-11-12v41 / 23pendingNo
1765gpt-5Pelagic juvenile turtles (Louisiana, July 2015): cloacal swabs vs all sample types (body-site/context within location) ( high in feces compared to in juvenile organism marine water body cloaca state of louisiana juvenile gulf of mexico united states of america chelonia mydas juvenile stage offshore )2025-11-12v41 / 39pendingNo
1765gpt-5All sample types: pelagic vs neritic juvenile turtles (habitat/region contrast) ( high in feces marine water body state of louisiana gulf of mexico offshore compared to saint andrew bay saint joseph bay sea grass bed santa rosa island in juvenile organism cloaca juvenile chelonia mydas united states of america juvenile stage )2025-11-12v41 / 48pendingNo
1765gpt-5Cloacal microbiome: pelagic vs neritic juvenile turtles (habitat/region contrast, same season) ( high in saint andrew bay saint joseph bay sea grass bed santa rosa island compared to marine water body gulf of mexico state of louisiana offshore in juvenile organism cloaca juvenile chelonia mydas united states of america juvenile stage )2025-11-12v41 / 61pendingNo
1765gpt-5Cloacal microbiome: pelagic vs neritic juvenile turtles (habitat/region contrast, same season) ( high in marine water body gulf of mexico state of louisiana offshore compared to saint andrew bay saint joseph bay sea grass bed santa rosa island in juvenile organism cloaca juvenile chelonia mydas united states of america juvenile stage )2025-11-12v41 / 66pendingNo
1765gpt-5All sample types: pelagic vs neritic juvenile turtles (habitat/region contrast) ( high in saint andrew bay saint joseph bay sea grass bed santa rosa island compared to feces marine water body state of louisiana gulf of mexico offshore in juvenile organism cloaca juvenile chelonia mydas united states of america juvenile stage )2025-11-12v41 / 72pendingNo
1765gpt-5Pelagic juvenile turtles (Louisiana, offshore; July 2015) - Cloacal swabs (common juvenile organism, marine water body, cloaca, state of louisiana, juvenile, gulf of mexico, united states of america, chelonia mydas, juvenile stage, offshore)2025-11-12v41 / 84pendingNo
1765gpt-5Pelagic juvenile turtles (Louisiana, offshore; July 2015) - All samples (common juvenile organism, feces, marine water body, cloaca, state of louisiana, juvenile, gulf of mexico, united states of america, chelonia mydas, juvenile stage, offshore)2025-11-12v41 / 87pendingNo
1765gpt-5Neritic juvenile turtles (Northern Florida; Sept 2015) - Cloacal swabs (common santa rosa island, , saint andrew bay, juvenile organism, cloaca, saint joseph bay, juvenile, united states of america, chelonia mydas, sea grass bed, juvenile stage)2025-11-12v41 / 99pendingNo

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