Experiment ID: 1753

Field Description
namethe microbial biogeography of the gastrointestinal tract of preterm and term lambs (7272652) - gpt-5
proj_id7272652
sraprjna594238
date_of_upload12/11/2025 12:51
doi10.1038/s41598-020-66056-z
modelgpt-5
dbbact_id649
dbbact_linkhttps://dbbact.org/exp_info/649

Annotations for experiment:

term enrichment score
TermScore
premature birth0.666667
luminal content0.300000
small intestine0.285714
mucosa0.256410
new zealand0.250000
jejunum0.194690
LOWER IN luminal content0.125000
duodenum0.122905
LOWER IN mucosa0.111111
ovis aries0.111111
ileum0.100000
LOWER IN male organism0.100000
male organism0.092308
LOWER IN jejunum0.090909
LOWER IN female organism0.086957
female organism0.084507
colon0.083333
LOWER IN duodenum0.076923
Fraction of dbbact annotations with this term covered by the query
TermScore
luminal content0.500000
premature birth0.500000
LOWER IN luminal content0.500000
LOWER IN mucosa0.250000
mucosa0.200000
small intestine0.166667
LOWER IN male organism0.166667
new zealand0.142857
LOWER IN jejunum0.125000
jejunum0.111111
LOWER IN female organism0.111111
LOWER IN duodenum0.083333
duodenum0.066667
ovis aries0.058824
male organism0.058824
ileum0.052632
female organism0.052632
colon0.043478
Fraction of annotations for the query sequences containing the term
TermScore
small intestine1.000000
colon1.000000
premature birth1.000000
ovis aries1.000000
ileum1.000000
new zealand1.000000
postnatal age six weeks1.000000
rotorua1.000000
jejunum0.785714
duodenum0.785714
mucosa0.357143
luminal content0.214286
female organism0.214286
male organism0.214286
LOWER IN mucosa0.071429
LOWER IN male organism0.071429
LOWER IN luminal content0.071429
LOWER IN jejunum0.071429
LOWER IN duodenum0.071429
LOWER IN female organism0.071429
Number of experiments associating the term to the sequence
TermScore
luminal content1.000000
jejunum1.000000
duodenum1.000000
LOWER IN mucosa1.000000
small intestine1.000000
colon1.000000
premature birth1.000000
ovis aries1.000000
ileum1.000000
new zealand1.000000
postnatal age six weeks1.000000
rotorua1.000000
female organism1.000000
LOWER IN male organism1.000000
mucosa1.000000
LOWER IN luminal content1.000000
LOWER IN jejunum1.000000
LOWER IN duodenum1.000000
male organism1.000000
LOWER IN female organism1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1753gpt-5Sex-associated differences in lamb gut microbiome (male vs female) ( high in male organism compared to female organism in small intestine colon premature birth ovis aries ileum new zealand postnatal age six weeks jejunum rotorua duodenum )2025-11-12v31 / 1pendingNo
1753gpt-5Male lamb samples (all gut sample types) (dominant small intestine, male organism, , colon, premature birth, ovis aries, ileum, new zealand, postnatal age six weeks, jejunum, rotorua, duodenum)2025-11-12v31 / 8pendingNo
1753gpt-5Male lamb samples (all gut sample types) (common small intestine, male organism, , colon, premature birth, ovis aries, ileum, new zealand, postnatal age six weeks, jejunum, rotorua, duodenum)2025-11-12v31 / 9pendingNo
1753gpt-5All lamb gut microbiome samples from Rotorua, NZ (dominant small intestine, , colon, premature birth, mucosa, ovis aries, ileum, new zealand, postnatal age six weeks, jejunum, rotorua, duodenum)2025-11-12v31 / 9pendingNo
1753gpt-5Mucosal scrapings from lambs (combined 'Scraping' spellings) (common small intestine, , colon, premature birth, mucosa, ovis aries, ileum, new zealand, postnatal age six weeks, rotorua)2025-11-12v31 / 10pendingNo
1753gpt-5Female lamb samples (all gut sample types) (dominant small intestine, , colon, premature birth, ovis aries, ileum, new zealand, postnatal age six weeks, female organism, jejunum, rotorua, duodenum)2025-11-12v31 / 10pendingNo
1753gpt-5Mucosal-associated vs luminal gut microbiota in lambs ( high in mucosa compared to luminal content jejunum duodenum in small intestine colon premature birth ovis aries ileum new zealand postnatal age six weeks rotorua )2025-11-12v31 / 10pendingNo
1753gpt-5Luminal content (all gut sites) from lambs (dominant small intestine, , colon, premature birth, luminal content, ovis aries, ileum, new zealand, postnatal age six weeks, jejunum, rotorua, duodenum)2025-11-12v31 / 11pendingNo
1753gpt-5Mucosal scrapings from lambs (combined 'Scraping' spellings) (dominant small intestine, , colon, premature birth, mucosa, ovis aries, ileum, new zealand, postnatal age six weeks, rotorua)2025-11-12v31 / 11pendingNo
1753gpt-5All lamb gut microbiome samples from Rotorua, NZ (common small intestine, , colon, premature birth, mucosa, ovis aries, ileum, new zealand, postnatal age six weeks, jejunum, rotorua, duodenum)2025-11-12v31 / 11pendingNo
1753gpt-5Female lamb samples (all gut sample types) (common small intestine, , colon, premature birth, ovis aries, ileum, new zealand, postnatal age six weeks, female organism, jejunum, rotorua, duodenum)2025-11-12v31 / 14pendingNo
1753gpt-5Sex-associated differences in lamb gut microbiome (male vs female) ( high in female organism compared to male organism in small intestine colon premature birth ovis aries ileum new zealand postnatal age six weeks jejunum rotorua duodenum )2025-11-12v31 / 19pendingNo
1753gpt-5Luminal content (all gut sites) from lambs (common small intestine, , colon, premature birth, luminal content, ovis aries, ileum, new zealand, postnatal age six weeks, jejunum, rotorua, duodenum)2025-11-12v31 / 20pendingNo
1753gpt-5Mucosal-associated vs luminal gut microbiota in lambs ( high in luminal content jejunum duodenum compared to mucosa in small intestine colon premature birth ovis aries ileum new zealand postnatal age six weeks rotorua )2025-11-12v31 / 497pendingNo

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