Experiment ID: 1747

Field Description
namemicrobial composition predicts genital tract inflammation and persistent bacterial vaginosis in south african adolescent females (5736802) - gpt-4o-mini-2024-07-18
proj_id5736802
sraprjeb15497
date_of_upload12/11/2025 12:28
doi10.1128/iai.00410-17
modelgpt-4o-mini-2024-07-18
dbbact_id213
dbbact_linkhttps://dbbact.org/exp_info/213

Annotations for experiment:

term enrichment score
TermScore
20-year-old human stage0.666667
south africa0.166667
adolescent stage0.142857
vagina0.117647
female organism0.100000
homo sapiens0.005168
Fraction of dbbact annotations with this term covered by the query
TermScore
20-year-old human stage0.500000
south africa0.090909
adolescent stage0.076923
vagina0.062500
female organism0.052632
homo sapiens0.002591
Fraction of annotations for the query sequences containing the term
TermScore
20-year-old human stage1.000000
16-year-old human stage1.000000
18-year-old human stage1.000000
21-year-old human stage1.000000
adolescent stage1.000000
vagina1.000000
19-year-old human stage1.000000
hiv-negative1.000000
female organism1.000000
south africa1.000000
homo sapiens1.000000
republic of south africa1.000000
hormonal contraception use1.000000
vaginal fluid1.000000
22-year-old human stage1.000000
cape town1.000000
17-year-old human stage1.000000
low inflammation0.500000
high inflammation0.500000
LOWER IN high inflammation0.166667
LOWER IN low inflammation0.166667
Exp. ID User ID Description Date Region Sequences Status Flag
1747gpt-4o-mini-2024-07-18Low Inflammation Microbiota Samples (dominant 20-year-old human stage, 16-year-old human stage, 18-year-old human stage, 21-year-old human stage, adolescent stage, vagina, 19-year-old human stage, hiv-negative, low inflammation, female organism, south africa, homo sapiens, republic of south africa, hormonal contraception use, vaginal fluid, 22-year-old human stage, cape town, 17-year-old human stage)2025-11-12v41 / 13pendingNo
1747gpt-4o-mini-2024-07-18High Inflammation Microbiota Samples (dominant 20-year-old human stage, 16-year-old human stage, 18-year-old human stage, 21-year-old human stage, adolescent stage, vagina, 19-year-old human stage, high inflammation, hiv-negative, female organism, south africa, homo sapiens, republic of south africa, hormonal contraception use, vaginal fluid, 22-year-old human stage, cape town, 17-year-old human stage)2025-11-12v41 / 17pendingNo
1747gpt-4o-mini-2024-07-18Low Inflammation Microbiota Samples (common 20-year-old human stage, 16-year-old human stage, 18-year-old human stage, 21-year-old human stage, adolescent stage, vagina, 19-year-old human stage, hiv-negative, low inflammation, female organism, south africa, homo sapiens, republic of south africa, hormonal contraception use, vaginal fluid, 22-year-old human stage, cape town, 17-year-old human stage)2025-11-12v41 / 51pendingNo
1747gpt-4o-mini-2024-07-18High Inflammation Microbiota Samples (common 20-year-old human stage, 16-year-old human stage, 18-year-old human stage, 21-year-old human stage, adolescent stage, vagina, 19-year-old human stage, high inflammation, hiv-negative, female organism, south africa, homo sapiens, republic of south africa, hormonal contraception use, vaginal fluid, 22-year-old human stage, cape town, 17-year-old human stage)2025-11-12v41 / 56pendingNo
1747gpt-4o-mini-2024-07-18High vs Low Inflammation Microbiota in Vaginal Samples ( high in high inflammation compared to low inflammation in 20-year-old human stage 16-year-old human stage 18-year-old human stage 21-year-old human stage adolescent stage vagina 19-year-old human stage hiv-negative female organism south africa homo sapiens republic of south africa hormonal contraception use vaginal fluid 22-year-old human stage cape town 17-year-old human stage )2025-11-12v41 / 56pendingNo
1747gpt-4o-mini-2024-07-18High vs Low Inflammation Microbiota in Vaginal Samples ( high in low inflammation compared to high inflammation in 20-year-old human stage 16-year-old human stage 18-year-old human stage 21-year-old human stage adolescent stage vagina 19-year-old human stage hiv-negative female organism south africa homo sapiens republic of south africa hormonal contraception use vaginal fluid 22-year-old human stage cape town 17-year-old human stage )2025-11-12v41 / 223pendingNo

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