Experiment ID: 1626

Field Description
nameresponse of the human gut and saliva microbiome to urbanization in cameroon (7028744) - gpt-4o-mini-2024-07-18
proj_id7028744
sraprjeb30836
date_of_upload05/11/2025 14:23
doi10.1038/s41598-020-59849-9
modelgpt-4o-mini-2024-07-18

Annotations for experiment:

term enrichment score
TermScore
cameroon0.307692
yaounde0.266667
urban biome0.173913
LOWER IN saliva0.035088
LOWER IN feces0.025974
human adult stage0.023256
saliva0.014815
homo sapiens0.002591
feces0.002291
Fraction of dbbact annotations with this term covered by the query
TermScore
yaounde0.333333
cameroon0.200000
urban biome0.142857
LOWER IN saliva0.025641
LOWER IN feces0.016949
human adult stage0.011765
saliva0.007519
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
human adult stage1.000000
no antibiotic use1.000000
homo sapiens1.000000
cameroon0.666667
feces0.500000
saliva0.500000
yaounde0.222222
urban biome0.222222
rural area0.222222
semi-urban0.222222
mbalmayo0.222222
LOWER IN saliva0.055556
LOWER IN feces0.055556
Number of experiments associating the term to the sequence
TermScore
feces1.000000
LOWER IN saliva1.000000
human adult stage1.000000
no antibiotic use1.000000
homo sapiens1.000000
saliva1.000000
LOWER IN feces1.000000
cameroon1.000000
yaounde1.000000
urban biome1.000000
rural area1.000000
semi-urban1.000000
mbalmayo1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1626models/gemini-1.5-flash-latestFecal Samples from Healthy Individuals (dominant human adult stage, homo sapiens, no antibiotic use, feces)2025-11-05v41 / 9pendingNo
1626models/gemini-1.5-flash-latestFecal Samples from Rural Population (dominant feces, cameroon, homo sapiens, human adult stage, no antibiotic use, rural area)2025-11-05v41 / 9pendingNo
1626models/gemini-1.5-flash-latestFecal Samples from Semi-Urban Population (dominant feces, cameroon, homo sapiens, semi-urban, human adult stage, no antibiotic use, mbalmayo)2025-11-05v41 / 10pendingNo
1626models/gemini-1.5-flash-latestFecal Samples from Urban Population (dominant feces, cameroon, yaounde, homo sapiens, human adult stage, urban biome, no antibiotic use)2025-11-05v41 / 13pendingNo
1626models/gemini-1.5-flash-latestSaliva Samples from Healthy Individuals (dominant human adult stage, saliva, no antibiotic use, homo sapiens)2025-11-05v41 / 14pendingNo
1626models/gemini-1.5-flash-latestSaliva Samples from Rural Population (dominant cameroon, homo sapiens, human adult stage, no antibiotic use, rural area, saliva)2025-11-05v41 / 14pendingNo
1626models/gemini-1.5-flash-latestSaliva Samples from Urban Population (dominant cameroon, yaounde, homo sapiens, human adult stage, urban biome, no antibiotic use, saliva)2025-11-05v41 / 17pendingNo
1626models/gemini-1.5-flash-latestSaliva Samples from Semi-Urban Population (dominant cameroon, homo sapiens, semi-urban, human adult stage, no antibiotic use, mbalmayo, saliva)2025-11-05v41 / 18pendingNo
1626models/gemini-1.5-flash-latestSaliva Samples from Urban Population (common cameroon, yaounde, homo sapiens, human adult stage, urban biome, no antibiotic use, saliva)2025-11-05v41 / 107pendingNo
1626models/gemini-1.5-flash-latestSaliva Samples from Semi-Urban Population (common cameroon, homo sapiens, semi-urban, human adult stage, no antibiotic use, mbalmayo, saliva)2025-11-05v41 / 108pendingNo
1626models/gemini-1.5-flash-latestSaliva Samples from Healthy Individuals (common human adult stage, saliva, no antibiotic use, homo sapiens)2025-11-05v41 / 109pendingNo
1626models/gemini-1.5-flash-latestSaliva Samples from Rural Population (common cameroon, homo sapiens, human adult stage, no antibiotic use, rural area, saliva)2025-11-05v41 / 125pendingNo
1626models/gemini-1.5-flash-latestFecal Samples from Healthy Individuals (common human adult stage, homo sapiens, no antibiotic use, feces)2025-11-05v41 / 127pendingNo
1626models/gemini-1.5-flash-latestFecal Samples from Semi-Urban Population (common feces, cameroon, homo sapiens, semi-urban, human adult stage, no antibiotic use, mbalmayo)2025-11-05v41 / 130pendingNo
1626models/gemini-1.5-flash-latestFecal Samples from Rural Population (common feces, cameroon, homo sapiens, human adult stage, no antibiotic use, rural area)2025-11-05v41 / 146pendingNo
1626models/gemini-1.5-flash-latestFecal Samples from Urban Population (common feces, cameroon, yaounde, homo sapiens, human adult stage, urban biome, no antibiotic use)2025-11-05v41 / 155pendingNo
1626models/gemini-1.5-flash-latestFecal vs Saliva Microbiome in Healthy Individuals ( high in saliva compared to feces in human adult stage no antibiotic use homo sapiens )2025-11-05v41 / 858pendingNo
1626models/gemini-1.5-flash-latestFecal vs Saliva Microbiome in Healthy Individuals ( high in feces compared to saliva in human adult stage no antibiotic use homo sapiens )2025-11-05v41 / 1328pendingNo

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