Experiment ID: 1617

Field Description
nameassessment of bacterial communities associated with the skin of costa rican amphibians at la selva biological station (6129598) - gpt-4o-mini-2024-07-18
proj_id6129598
sraprjna470570
date_of_upload04/11/2025 16:40
doi10.3389/fmicb.2018.02001
modelgpt-4o-mini-2024-07-18

Annotations for experiment:

term enrichment score
TermScore
skin of body0.500000
epidermis0.285714
craugastor bransfordii0.250000
craugastor fitzingeri0.250000
rhaebo haematiticus0.250000
oophaga pumilio0.250000
costa rica0.222222
Fraction of dbbact annotations with this term covered by the query
TermScore
craugastor bransfordii0.500000
craugastor fitzingeri0.500000
rhaebo haematiticus0.500000
oophaga pumilio0.500000
skin of body0.333333
epidermis0.166667
costa rica0.125000
Fraction of annotations for the query sequences containing the term
TermScore
skin of body1.000000
heredia province1.000000
epidermis1.000000
province (costa rica)1.000000
la selva biological station1.000000
zone of skin1.000000
costa rica1.000000
craugastor bransfordii0.166667
craugastor fitzingeri0.166667
rhaebo haematiticus0.166667
oophaga pumilio0.166667
Number of experiments associating the term to the sequence
TermScore
skin of body1.000000
heredia province1.000000
epidermis1.000000
province (costa rica)1.000000
craugastor bransfordii1.000000
la selva biological station1.000000
zone of skin1.000000
costa rica1.000000
craugastor fitzingeri1.000000
rhaebo haematiticus1.000000
oophaga pumilio1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1617naOophaga pumilio Samples (dominant skin of body, oophaga pumilio, heredia province, epidermis, province (costa rica), la selva biological station, zone of skin, costa rica)2025-11-04v41 / 9pendingNo
1617naCraugastor bransfordii Samples (dominant skin of body, heredia province, epidermis, province (costa rica), la selva biological station, zone of skin, costa rica)2025-11-04v41 / 9pendingNo
1617naCraugastor bransfordii Samples (dominant skin of body, heredia province, epidermis, province (costa rica), craugastor bransfordii, la selva biological station, zone of skin, costa rica)2025-11-04v41 / 12pendingNo
1617naRhaebo haematiticus Samples (dominant skin of body, heredia province, epidermis, province (costa rica), rhaebo haematiticus, la selva biological station, zone of skin, costa rica)2025-11-04v41 / 13pendingNo
1617naCraugastor fitzingeri Samples (dominant skin of body, heredia province, epidermis, province (costa rica), craugastor fitzingeri, la selva biological station, zone of skin, costa rica)2025-11-04v41 / 14pendingNo
1617naCraugastor bransfordii Samples (dominant skin of body, heredia province, epidermis, province (costa rica), la selva biological station, zone of skin, costa rica)2025-11-04v41 / 14pendingNo
1617naCraugastor bransfordii Samples (common skin of body, heredia province, epidermis, province (costa rica), la selva biological station, zone of skin, costa rica)2025-11-04v41 / 58pendingNo
1617naOophaga pumilio Samples (common skin of body, oophaga pumilio, heredia province, epidermis, province (costa rica), la selva biological station, zone of skin, costa rica)2025-11-04v41 / 61pendingNo
1617naCraugastor bransfordii Samples (common skin of body, heredia province, epidermis, province (costa rica), la selva biological station, zone of skin, costa rica)2025-11-04v41 / 99pendingNo
1617naRhaebo haematiticus Samples (common skin of body, heredia province, epidermis, province (costa rica), rhaebo haematiticus, la selva biological station, zone of skin, costa rica)2025-11-04v41 / 121pendingNo
1617naCraugastor fitzingeri Samples (common skin of body, heredia province, epidermis, province (costa rica), craugastor fitzingeri, la selva biological station, zone of skin, costa rica)2025-11-04v41 / 136pendingNo
1617naCraugastor bransfordii Samples (common skin of body, heredia province, epidermis, province (costa rica), craugastor bransfordii, la selva biological station, zone of skin, costa rica)2025-11-04v41 / 175pendingNo

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