Experiment ID: 1601

Field Description
namethe microbiome of uncontacted amerindians (4517851) - gpt-4o-mini-2024-07-18
proj_id4517851
sraera387449
date_of_upload03/11/2025 16:39
doi10.1126/sciadv.1500183
modelgpt-4o-mini-2024-07-18

Annotations for experiment:

term enrichment score
TermScore
venezuela0.333333
LOWER IN oral cavity0.117647
oral cavity0.047619
LOWER IN feces0.030769
human adult stage0.023256
homo sapiens0.002591
feces0.002288
Fraction of dbbact annotations with this term covered by the query
TermScore
venezuela0.200000
LOWER IN oral cavity0.090909
oral cavity0.025641
LOWER IN feces0.016949
human adult stage0.011765
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
amazonas state1.000000
human adult stage1.000000
amazonas region1.000000
no antibiotic use1.000000
venezuela1.000000
jungle1.000000
feces0.333333
zone of skin0.333333
oral cavity0.333333
LOWER IN oral cavity0.166667
LOWER IN zone of skin0.166667
LOWER IN feces0.166667
Number of experiments associating the term to the sequence
TermScore
feces1.000000
LOWER IN oral cavity1.000000
homo sapiens1.000000
amazonas state1.000000
human adult stage1.000000
amazonas region1.000000
no antibiotic use1.000000
venezuela1.000000
jungle1.000000
LOWER IN zone of skin1.000000
zone of skin1.000000
LOWER IN feces1.000000
oral cavity1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1601naFecal Samples from Yanomami (dominant homo sapiens, amazonas state, feces, human adult stage, amazonas region, no antibiotic use, venezuela, jungle)2025-11-03v11 / 21pendingNo
1601naSkin Samples from Yanomami (dominant homo sapiens, amazonas state, human adult stage, amazonas region, no antibiotic use, venezuela, jungle, zone of skin)2025-11-03v11 / 21pendingNo
1601naOral Samples from Yanomami (dominant homo sapiens, amazonas state, human adult stage, amazonas region, no antibiotic use, venezuela, oral cavity, jungle)2025-11-03v11 / 23pendingNo
1601naOral vs Skin microbiome in Yanomami ( high in oral cavity compared to zone of skin in homo sapiens amazonas state human adult stage amazonas region no antibiotic use venezuela jungle )2025-11-03v11 / 41pendingNo
1601naOral Samples from Yanomami (common homo sapiens, amazonas state, human adult stage, amazonas region, no antibiotic use, venezuela, oral cavity, jungle)2025-11-03v11 / 56pendingNo
1601naSkin Samples from Yanomami (common homo sapiens, amazonas state, human adult stage, amazonas region, no antibiotic use, venezuela, jungle, zone of skin)2025-11-03v11 / 62pendingNo
1601naFecal Samples from Yanomami (common homo sapiens, amazonas state, feces, human adult stage, amazonas region, no antibiotic use, venezuela, jungle)2025-11-03v11 / 67pendingNo
1601naFecal vs Oral microbiome in Yanomami ( high in oral cavity compared to feces in homo sapiens amazonas state human adult stage amazonas region no antibiotic use venezuela jungle )2025-11-03v11 / 92pendingNo
1601naFecal vs Skin microbiome in Yanomami ( high in zone of skin compared to feces in homo sapiens amazonas state human adult stage amazonas region no antibiotic use venezuela jungle )2025-11-03v11 / 95pendingNo
1601naOral vs Skin microbiome in Yanomami ( high in zone of skin compared to oral cavity in homo sapiens amazonas state human adult stage amazonas region no antibiotic use venezuela jungle )2025-11-03v11 / 128pendingNo
1601naFecal vs Skin microbiome in Yanomami ( high in feces compared to zone of skin in homo sapiens amazonas state human adult stage amazonas region no antibiotic use venezuela jungle )2025-11-03v11 / 147pendingNo
1601naFecal vs Oral microbiome in Yanomami ( high in feces compared to oral cavity in homo sapiens amazonas state human adult stage amazonas region no antibiotic use venezuela jungle )2025-11-03v11 / 218pendingNo

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