Experiment ID: 1595

Field Description
namethe maturing development of gut microbiota in commercial piglets during the weaning transition (5591375) - gpt-5-chat-latest
proj_id5591375
srasrp102931
date_of_upload02/11/2025 15:12
doi10.3389/fmicb.2017.01688
modelgpt-5-chat-latest

Annotations for experiment:

term enrichment score
TermScore
pig farm0.666667
sus scrofa domesticus0.666667
pre-weaning0.444444
jiangxi province0.400000
post-weaning0.344828
LOWER IN pre-weaning0.222222
LOWER IN post-weaning0.133333
male organism0.111111
female organism0.100000
intestine0.062500
china0.009390
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
pre-weaning1.000000
LOWER IN post-weaning1.000000
LOWER IN pre-weaning0.500000
pig farm0.500000
sus scrofa domesticus0.500000
post-weaning0.333333
jiangxi province0.250000
male organism0.058824
female organism0.052632
intestine0.032258
china0.004717
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
china1.000000
no antibiotic use1.000000
female organism1.000000
intestine1.000000
pig farm1.000000
feces1.000000
yichun city prefecture1.000000
sus scrofa domesticus1.000000
commercial piglet1.000000
jiangxi province1.000000
male organism1.000000
post-weaning0.357143
pre-weaning0.285714
weaning0.214286
LOWER IN pre-weaning0.142857
LOWER IN post-weaning0.071429
LOWER IN weaning0.071429
Number of experiments associating the term to the sequence
TermScore
post-weaning1.000000
LOWER IN pre-weaning1.000000
china1.000000
no antibiotic use1.000000
female organism1.000000
intestine1.000000
pig farm1.000000
feces1.000000
yichun city prefecture1.000000
sus scrofa domesticus1.000000
commercial piglet1.000000
jiangxi province1.000000
male organism1.000000
pre-weaning1.000000
LOWER IN post-weaning1.000000
weaning1.000000
LOWER IN weaning1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1595naPiglet fecal samples collected 21 days after weaning (21d) (dominant china, post-weaning, no antibiotic use, female organism, intestine, pig farm, feces, yichun city prefecture, sus scrofa domesticus, commercial piglet, jiangxi province, male organism)2025-11-02v31 / 10pendingNo
1595naPiglet fecal samples collected 10 days before weaning (b10d) (dominant china, no antibiotic use, female organism, intestine, pig farm, feces, yichun city prefecture, sus scrofa domesticus, commercial piglet, jiangxi province, male organism)2025-11-02v31 / 11pendingNo
1595naPiglet fecal samples collected 10 days after weaning (10d) (dominant china, post-weaning, no antibiotic use, female organism, intestine, pig farm, feces, yichun city prefecture, sus scrofa domesticus, commercial piglet, jiangxi province, male organism)2025-11-02v31 / 15pendingNo
1595naPiglet fecal samples collected on weaning day (00d) (dominant china, no antibiotic use, female organism, intestine, weaning, pig farm, feces, yichun city prefecture, sus scrofa domesticus, commercial piglet, jiangxi province, male organism)2025-11-02v31 / 17pendingNo
1595naPiglet fecal samples collected 10 days before weaning (b10d) (dominant jiangxi province, china, no antibiotic use, female organism, intestine, pig farm, feces, yichun city prefecture, sus scrofa domesticus, commercial piglet, pre-weaning, male organism)2025-11-02v31 / 21pendingNo
1595naImmediate effect of weaning on fecal microbiome (before vs on weaning day) ( high in pre-weaning compared to weaning in china no antibiotic use female organism intestine pig farm feces yichun city prefecture sus scrofa domesticus commercial piglet jiangxi province male organism )2025-11-02v31 / 72pendingNo
1595naPiglet fecal samples collected 10 days before weaning (b10d) (common china, no antibiotic use, female organism, intestine, pig farm, feces, yichun city prefecture, sus scrofa domesticus, commercial piglet, jiangxi province, male organism)2025-11-02v31 / 147pendingNo
1595naPiglet fecal samples collected 10 days before weaning (b10d) (common jiangxi province, china, no antibiotic use, female organism, intestine, pig farm, feces, yichun city prefecture, sus scrofa domesticus, commercial piglet, pre-weaning, male organism)2025-11-02v31 / 171pendingNo
1595naImmediate effect of weaning on fecal microbiome (before vs on weaning day) ( high in weaning compared to pre-weaning in china no antibiotic use female organism intestine pig farm feces yichun city prefecture sus scrofa domesticus commercial piglet jiangxi province male organism )2025-11-02v31 / 173pendingNo
1595naPiglet fecal samples collected on weaning day (00d) (common china, no antibiotic use, female organism, intestine, weaning, pig farm, feces, yichun city prefecture, sus scrofa domesticus, commercial piglet, jiangxi province, male organism)2025-11-02v31 / 201pendingNo
1595naPiglet fecal samples collected 10 days after weaning (10d) (common china, post-weaning, no antibiotic use, female organism, intestine, pig farm, feces, yichun city prefecture, sus scrofa domesticus, commercial piglet, jiangxi province, male organism)2025-11-02v31 / 268pendingNo
1595naPiglet fecal samples collected 21 days after weaning (21d) (common china, post-weaning, no antibiotic use, female organism, intestine, pig farm, feces, yichun city prefecture, sus scrofa domesticus, commercial piglet, jiangxi province, male organism)2025-11-02v31 / 315pendingNo
1595naPre-weaning vs post-weaning fecal microbiome in piglets ( high in pre-weaning compared to post-weaning in china no antibiotic use female organism intestine pig farm feces yichun city prefecture sus scrofa domesticus commercial piglet jiangxi province male organism )2025-11-02v31 / 333pendingNo
1595naPre-weaning vs post-weaning fecal microbiome in piglets ( high in post-weaning compared to pre-weaning in china no antibiotic use female organism intestine pig farm feces yichun city prefecture sus scrofa domesticus commercial piglet jiangxi province male organism )2025-11-02v31 / 658pendingNo

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