Experiment ID: 1569

Field Description
nameemergence shapes the structure of the seed microbiota (4309697) - gpt-4o-mini-2024-07-18
proj_id4309697
sraerp006367
date_of_upload30/10/2025 14:42
doi10.1128/aem.03722-14
modelgpt-4o-mini-2024-07-18

Annotations for experiment:

term enrichment score
TermScore
solanum lycopersicum0.185185
Fraction of dbbact annotations with this term covered by the query
TermScore
solanum lycopersicum0.142857
Fraction of annotations for the query sequences containing the term
TermScore
beaucouzé, france1.000000
brassica rapa var. rapa0.368421
brassica oleracea var. capitata0.368421
solanum lycopersicum0.263158
LOWER IN brassica oleracea var. capitata0.052632
LOWER IN brassica rapa var. rapa0.052632
Number of experiments associating the term to the sequence
TermScore
solanum lycopersicum1.000000
beaucouzé, france1.000000
brassica rapa var. rapa1.000000
brassica oleracea var. capitata1.000000
LOWER IN brassica oleracea var. capitata1.000000
LOWER IN brassica rapa var. rapa1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1569naComparison of Brassica species at the germinating seed stage ( high in brassica oleracea var. capitata compared to brassica rapa var. rapa in beaucouzé, france )2025-10-30v41 / 2pendingNo
1569naSolanum lycopersicum Seedlings (dominant solanum lycopersicum, beaucouzé, france)2025-10-30v41 / 3pendingNo
1569naBrassica rapa var. rapa Germinating Seeds (dominant brassica rapa var. rapa, beaucouzé, france)2025-10-30v41 / 8pendingNo
1569naBrassica oleracea var. capitata Seedlings (dominant brassica oleracea var. capitata, beaucouzé, france)2025-10-30v41 / 9pendingNo
1569naComparison of Brassica species at the germinating seed stage ( high in brassica rapa var. rapa compared to brassica oleracea var. capitata in beaucouzé, france )2025-10-30v41 / 11pendingNo
1569naBrassica oleracea var. capitata Germinating Seeds (dominant brassica oleracea var. capitata, beaucouzé, france)2025-10-30v41 / 12pendingNo
1569naBrassica oleracea var. capitata Seedlings (common brassica oleracea var. capitata, beaucouzé, france)2025-10-30v41 / 12pendingNo
1569naBrassica rapa var. rapa Seedlings (dominant brassica rapa var. rapa, beaucouzé, france)2025-10-30v41 / 12pendingNo
1569naBrassica oleracea var. capitata Seeds (dominant brassica oleracea var. capitata, beaucouzé, france)2025-10-30v41 / 12pendingNo
1569naBrassica rapa var. rapa Seeds (dominant brassica rapa var. rapa, beaucouzé, france)2025-10-30v41 / 12pendingNo
1569naSolanum lycopersicum Seeds (dominant solanum lycopersicum, beaucouzé, france)2025-10-30v41 / 12pendingNo
1569naSolanum lycopersicum Germinating Seeds (dominant solanum lycopersicum, beaucouzé, france)2025-10-30v41 / 14pendingNo
1569naBrassica oleracea var. capitata Seeds (common brassica oleracea var. capitata, beaucouzé, france)2025-10-30v41 / 17pendingNo
1569naBrassica rapa var. rapa Seedlings (common brassica rapa var. rapa, beaucouzé, france)2025-10-30v41 / 21pendingNo
1569naBrassica rapa var. rapa Seeds (common brassica rapa var. rapa, beaucouzé, france)2025-10-30v41 / 22pendingNo
1569naSolanum lycopersicum Seeds (common solanum lycopersicum, beaucouzé, france)2025-10-30v41 / 28pendingNo
1569naBrassica oleracea var. capitata Germinating Seeds (common brassica oleracea var. capitata, beaucouzé, france)2025-10-30v41 / 32pendingNo
1569naBrassica rapa var. rapa Germinating Seeds (common brassica rapa var. rapa, beaucouzé, france)2025-10-30v41 / 53pendingNo
1569naSolanum lycopersicum Germinating Seeds (common solanum lycopersicum, beaucouzé, france)2025-10-30v41 / 125pendingNo

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