Experiment ID: 1537

Field Description
nameeffects of sex and chronic cigarette smoke exposure on the mouse cecal microbiome (7135149) - gpt-4o-mini-2024-07-18
proj_id7135149
sraprjna589852
date_of_upload30/10/2025 14:22
doi10.1371/journal.pone.0230932
modelgpt-4o-mini-2024-07-18

Annotations for experiment:

term enrichment score
TermScore
province of british columbia0.500000
ovariectomy0.500000
cecal content0.250000
female organism0.100000
canada0.055556
human adult stage0.045455
mus musculus0.027027
LOWER IN control0.008850
control0.008811
Fraction of dbbact annotations with this term covered by the query
TermScore
province of british columbia0.333333
ovariectomy0.333333
cecal content0.142857
female organism0.052632
canada0.028571
human adult stage0.023256
mus musculus0.013699
LOWER IN control0.004545
control0.004444
Fraction of annotations for the query sequences containing the term
TermScore
cecal content1.000000
province of british columbia1.000000
female organism1.000000
province (canada)1.000000
mus musculus1.000000
canada1.000000
ovariectomy1.000000
human adult stage1.000000
smoke-exposed0.500000
air-exposed0.500000
control0.500000
LOWER IN air-exposed0.166667
LOWER IN control0.166667
LOWER IN smoke-exposed0.166667
Number of experiments associating the term to the sequence
TermScore
cecal content1.000000
province of british columbia1.000000
female organism1.000000
province (canada)1.000000
mus musculus1.000000
canada1.000000
ovariectomy1.000000
human adult stage1.000000
smoke-exposed1.000000
air-exposed1.000000
control1.000000
LOWER IN air-exposed1.000000
LOWER IN control1.000000
LOWER IN smoke-exposed1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1537naControl Ovariectomized Female Samples (dominant air-exposed, cecal content, province of british columbia, female organism, mus musculus, canada, control, ovariectomy, human adult stage, province (canada))2025-10-30v41 / 14pendingNo
1537naSmoke-Exposed Ovariectomized Female Samples (dominant cecal content, province of british columbia, female organism, province (canada), mus musculus, canada, ovariectomy, human adult stage, smoke-exposed)2025-10-30v41 / 14pendingNo
1537naCecal microbiota in smoke-exposed vs control ovariectomized females ( high in air-exposed control compared to smoke-exposed in cecal content province of british columbia female organism mus musculus canada ovariectomy human adult stage province (canada) )2025-10-30v41 / 20pendingNo
1537naCecal microbiota in smoke-exposed vs control ovariectomized females ( high in smoke-exposed compared to air-exposed control in cecal content province of british columbia female organism mus musculus canada ovariectomy human adult stage province (canada) )2025-10-30v41 / 24pendingNo
1537naControl Ovariectomized Female Samples (common air-exposed, cecal content, province of british columbia, female organism, mus musculus, canada, control, ovariectomy, human adult stage, province (canada))2025-10-30v41 / 166pendingNo
1537naSmoke-Exposed Ovariectomized Female Samples (common cecal content, province of british columbia, female organism, province (canada), mus musculus, canada, ovariectomy, human adult stage, smoke-exposed)2025-10-30v41 / 195pendingNo

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