Experiment ID: 1536

Field Description
nameresponse of the human gut and saliva microbiome to urbanization in cameroon (7028744) - gpt-4o-mini-2024-07-18
proj_id7028744
sraprjeb30836
date_of_upload30/10/2025 14:21
doi10.1038/s41598-020-59849-9
modelgpt-4o-mini-2024-07-18

Annotations for experiment:

term enrichment score
TermScore
cameroon0.444444
yaounde0.307692
urban biome0.235294
LOWER IN saliva0.052632
human adult stage0.045455
LOWER IN feces0.041667
saliva0.028986
homo sapiens0.005168
feces0.004566
Fraction of dbbact annotations with this term covered by the query
TermScore
yaounde0.500000
cameroon0.333333
urban biome0.250000
LOWER IN saliva0.050000
LOWER IN feces0.033333
human adult stage0.023256
saliva0.014925
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
human adult stage1.000000
no antibiotic use1.000000
cameroon0.666667
feces0.500000
saliva0.500000
urban biome0.222222
yaounde0.222222
rural area0.222222
semi-urban0.222222
mbalmayo0.222222
LOWER IN saliva0.055556
LOWER IN feces0.055556
Number of experiments associating the term to the sequence
TermScore
feces1.000000
LOWER IN saliva1.000000
homo sapiens1.000000
human adult stage1.000000
no antibiotic use1.000000
saliva1.000000
LOWER IN feces1.000000
urban biome1.000000
cameroon1.000000
yaounde1.000000
rural area1.000000
semi-urban1.000000
mbalmayo1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1536naFecal Samples from Healthy Individuals (dominant homo sapiens, human adult stage, feces, no antibiotic use)2025-10-30v41 / 9pendingNo
1536naFecal Samples from Rural Population (dominant human adult stage, homo sapiens, cameroon, feces, no antibiotic use, rural area)2025-10-30v41 / 9pendingNo
1536naFecal Samples from Semi-Urban Population (dominant semi-urban, human adult stage, homo sapiens, cameroon, feces, no antibiotic use, mbalmayo)2025-10-30v41 / 10pendingNo
1536naFecal Samples from Urban Population (dominant human adult stage, urban biome, homo sapiens, cameroon, yaounde, feces, no antibiotic use)2025-10-30v41 / 13pendingNo
1536naSaliva Samples from Healthy Individuals (dominant saliva, homo sapiens, human adult stage, no antibiotic use)2025-10-30v41 / 14pendingNo
1536naSaliva Samples from Rural Population (dominant saliva, human adult stage, homo sapiens, cameroon, no antibiotic use, rural area)2025-10-30v41 / 14pendingNo
1536naSaliva Samples from Urban Population (dominant saliva, human adult stage, urban biome, homo sapiens, cameroon, yaounde, no antibiotic use)2025-10-30v41 / 17pendingNo
1536naSaliva Samples from Semi-Urban Population (dominant saliva, semi-urban, human adult stage, homo sapiens, cameroon, no antibiotic use, mbalmayo)2025-10-30v41 / 18pendingNo
1536naSaliva Samples from Urban Population (common saliva, human adult stage, urban biome, homo sapiens, cameroon, yaounde, no antibiotic use)2025-10-30v41 / 107pendingNo
1536naSaliva Samples from Semi-Urban Population (common saliva, semi-urban, human adult stage, homo sapiens, cameroon, no antibiotic use, mbalmayo)2025-10-30v41 / 108pendingNo
1536naSaliva Samples from Healthy Individuals (common saliva, homo sapiens, human adult stage, no antibiotic use)2025-10-30v41 / 109pendingNo
1536naSaliva Samples from Rural Population (common saliva, human adult stage, homo sapiens, cameroon, no antibiotic use, rural area)2025-10-30v41 / 125pendingNo
1536naFecal Samples from Healthy Individuals (common homo sapiens, human adult stage, feces, no antibiotic use)2025-10-30v41 / 127pendingNo
1536naFecal Samples from Semi-Urban Population (common semi-urban, human adult stage, homo sapiens, cameroon, feces, no antibiotic use, mbalmayo)2025-10-30v41 / 130pendingNo
1536naFecal Samples from Rural Population (common human adult stage, homo sapiens, cameroon, feces, no antibiotic use, rural area)2025-10-30v41 / 146pendingNo
1536naFecal Samples from Urban Population (common human adult stage, urban biome, homo sapiens, cameroon, yaounde, feces, no antibiotic use)2025-10-30v41 / 155pendingNo
1536naFecal vs Saliva Microbiome in Healthy Individuals ( high in saliva compared to feces in homo sapiens human adult stage no antibiotic use )2025-10-30v41 / 858pendingNo
1536naFecal vs Saliva Microbiome in Healthy Individuals ( high in feces compared to saliva in homo sapiens human adult stage no antibiotic use )2025-10-30v41 / 1328pendingNo

Problems / suggestions? Please visit the dbBact forum