Experiment ID: 1532

Field Description
nameprokaryotic diversity in mangrove sediments across southeastern china fundamentally differs from that in other biomes (6739103) - gpt-4o-mini-2024-07-18
proj_id6739103
sraprjna475455
date_of_upload30/10/2025 14:20
doi10.1128/msystems.00442-19
modelgpt-4o-mini-2024-07-18

Annotations for experiment:

term enrichment score
TermScore
shenzhen city prefecture0.666667
spartina alterniflora0.296296
LOWER IN spartina alterniflora0.266667
LOWER IN marine sediment0.160000
marine sediment0.088235
china0.009390
Fraction of dbbact annotations with this term covered by the query
TermScore
shenzhen city prefecture0.500000
LOWER IN spartina alterniflora0.500000
spartina alterniflora0.250000
LOWER IN marine sediment0.142857
marine sediment0.052632
china0.004717
Fraction of annotations for the query sequences containing the term
TermScore
shenzhen city prefecture1.000000
sea coast1.000000
china1.000000
spartina alterniflora0.363636
s. alterniflora sediment0.363636
ecological invasion0.363636
mudflat sediment0.272727
marine sediment0.272727
LOWER IN marine sediment0.181818
LOWER IN spartina alterniflora0.181818
LOWER IN s. alterniflora sediment0.181818
LOWER IN ecological invasion0.181818
LOWER IN mudflat sediment0.181818
Number of experiments associating the term to the sequence
TermScore
spartina alterniflora1.000000
s. alterniflora sediment1.000000
ecological invasion1.000000
LOWER IN marine sediment1.000000
shenzhen city prefecture1.000000
sea coast1.000000
china1.000000
mudflat sediment1.000000
LOWER IN spartina alterniflora1.000000
LOWER IN s. alterniflora sediment1.000000
LOWER IN ecological invasion1.000000
LOWER IN mudflat sediment1.000000
marine sediment1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1532naS. alterniflora Sediment Samples (dominant shenzhen city prefecture, ecological invasion, china, sea coast, s. alterniflora sediment, spartina alterniflora)2025-10-30v41 / 2pendingNo
1532naMangrove Sediment Samples (common marine sediment, shenzhen city prefecture, sea coast, china)2025-10-30v41 / 291pendingNo
1532naMangrove Sediment Samples (common shenzhen city prefecture, sea coast, china)2025-10-30v41 / 305pendingNo
1532naS. alterniflora Sediment Samples (common shenzhen city prefecture, ecological invasion, china, sea coast, s. alterniflora sediment, spartina alterniflora)2025-10-30v41 / 595pendingNo
1532naMudflat Sediment Samples (common mudflat sediment, shenzhen city prefecture, sea coast, china)2025-10-30v41 / 667pendingNo
1532naMangrove vs Mudflat Sediment Microbiomes ( high in marine sediment compared to mudflat sediment in shenzhen city prefecture sea coast china )2025-10-30v41 / 759pendingNo
1532naMangrove vs S. alterniflora Sediment Microbiomes ( high in marine sediment compared to spartina alterniflora s. alterniflora sediment ecological invasion in shenzhen city prefecture sea coast china )2025-10-30v41 / 1776pendingNo
1532naMudflat vs S. alterniflora Sediment Microbiomes ( high in spartina alterniflora s. alterniflora sediment ecological invasion compared to mudflat sediment in shenzhen city prefecture sea coast china )2025-10-30v41 / 2450pendingNo
1532naMangrove vs Mudflat Sediment Microbiomes ( high in mudflat sediment compared to marine sediment in shenzhen city prefecture sea coast china )2025-10-30v41 / 3419pendingNo
1532naMudflat vs S. alterniflora Sediment Microbiomes ( high in mudflat sediment compared to spartina alterniflora s. alterniflora sediment ecological invasion in shenzhen city prefecture sea coast china )2025-10-30v41 / 4010pendingNo
1532naMangrove vs S. alterniflora Sediment Microbiomes ( high in spartina alterniflora s. alterniflora sediment ecological invasion compared to marine sediment in shenzhen city prefecture sea coast china )2025-10-30v41 / 4636pendingNo

Problems / suggestions? Please visit the dbBact forum