Experiment ID: 1510

Field Description
namedynamics of the fecal microbiome in patients with recurrent and nonrecurrent clostridium difficile infection (4847246) - gpt-4o-mini-2024-07-18
proj_id4847246
sraprjna307992
date_of_upload30/10/2025 14:13
doi10.1186/s13073-016-0298-8
modelgpt-4o-mini-2024-07-18

Annotations for experiment:

Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
no antibiotic use1.000000
ann arbor1.000000
homo sapiens1.000000
united states range1.000000
hospital1.000000
clostridium difficile colitis1.000000
human adult stage1.000000
index0.357143
recurrent0.357143
control diet0.285714
no stress: single housed control0.285714
control0.285714
negative control0.285714
no immunization: vehicle as control0.285714
nonrecurrent0.214286
reinfection0.142857
LOWER IN control diet0.142857
LOWER IN control0.142857
LOWER IN no stress: single housed control0.142857
LOWER IN negative control0.142857
LOWER IN no immunization: vehicle as control0.142857
LOWER IN nonrecurrent0.071429
LOWER IN index0.071429
LOWER IN recurrent0.071429
Exp. ID User ID Description Date Region Sequences Status Flag
1510naNonrecurrent vs Recurrent CDI Samples ( high in control diet control no stress: single housed control negative control no immunization: vehicle as control compared to recurrent in feces no antibiotic use ann arbor homo sapiens united states range hospital clostridium difficile colitis human adult stage )2025-10-30v41 / 1pendingNo
1510naNonrecurrent vs Recurrent CDI Samples ( high in recurrent compared to control diet control no stress: single housed control negative control no immunization: vehicle as control in feces no antibiotic use ann arbor homo sapiens united states range hospital clostridium difficile colitis human adult stage )2025-10-30v41 / 2pendingNo
1510naReinfection CDI Samples (common feces, no antibiotic use, ann arbor, reinfection, homo sapiens, united states range, hospital, clostridium difficile colitis, human adult stage)2025-10-30v41 / 5pendingNo
1510naIndex Samples from Nonrecurrent Patients vs Nonrecurrent CDI Samples ( high in nonrecurrent index compared to control diet control no stress: single housed control negative control no immunization: vehicle as control in feces no antibiotic use ann arbor homo sapiens united states range hospital clostridium difficile colitis human adult stage )2025-10-30v41 / 5pendingNo
1510naNonrecurrent CDI Samples (common feces, control diet, no antibiotic use, ann arbor, homo sapiens, united states range, no stress: single housed control, control, hospital, clostridium difficile colitis, negative control, human adult stage, no immunization: vehicle as control)2025-10-30v41 / 10pendingNo
1510naRecurrent CDI Samples (common feces, no antibiotic use, ann arbor, homo sapiens, united states range, recurrent, hospital, clostridium difficile colitis, human adult stage)2025-10-30v41 / 11pendingNo
1510naIndex Samples from Recurrent Patients (common feces, no antibiotic use, ann arbor, homo sapiens, united states range, recurrent, hospital, clostridium difficile colitis, index, human adult stage)2025-10-30v41 / 14pendingNo
1510naIndex Samples from Nonrecurrent Patients (common feces, no antibiotic use, ann arbor, homo sapiens, united states range, hospital, nonrecurrent, clostridium difficile colitis, index, human adult stage)2025-10-30v41 / 15pendingNo
1510naReinfection CDI Samples (dominant feces, no antibiotic use, ann arbor, reinfection, homo sapiens, united states range, hospital, clostridium difficile colitis, human adult stage)2025-10-30v41 / 17pendingNo
1510naIndex Samples from Nonrecurrent Patients vs Nonrecurrent CDI Samples ( high in control diet control no stress: single housed control negative control no immunization: vehicle as control compared to nonrecurrent index in feces no antibiotic use ann arbor homo sapiens united states range hospital clostridium difficile colitis human adult stage )2025-10-30v41 / 17pendingNo
1510naNonrecurrent CDI Samples (dominant feces, control diet, no antibiotic use, ann arbor, homo sapiens, united states range, no stress: single housed control, control, hospital, clostridium difficile colitis, negative control, human adult stage, no immunization: vehicle as control)2025-10-30v41 / 18pendingNo
1510naRecurrent CDI Samples (dominant feces, no antibiotic use, ann arbor, homo sapiens, united states range, recurrent, hospital, clostridium difficile colitis, human adult stage)2025-10-30v41 / 20pendingNo
1510naIndex Samples from Recurrent Patients (dominant feces, no antibiotic use, ann arbor, homo sapiens, united states range, recurrent, hospital, clostridium difficile colitis, index, human adult stage)2025-10-30v41 / 23pendingNo
1510naIndex Samples from Nonrecurrent Patients (dominant feces, no antibiotic use, ann arbor, homo sapiens, united states range, hospital, nonrecurrent, clostridium difficile colitis, index, human adult stage)2025-10-30v41 / 27pendingNo

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