Experiment ID: 149

Field Description
nameamphibian gut microbiota shifts differentially in community structure but converges on habitatspecific predicted functions
sraprjna320968
datamd5c4621978e2394b320d6ca3db405a3d1a
mapmd5f1418edf290ebbd7d0652051ae5421de

Annotations for experiment:

term enrichment score
TermScore
fire salamander0.333333
amphibian larval stage0.333333
LOWER IN stream0.320000
stream0.263158
salamandra salamandra0.250000
LOWER IN pond0.176471
mucus0.123077
pond0.094488
larval stage0.055556
germany0.040000
intestine0.032028
skin0.022663
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN stream0.333333
fire salamander0.200000
amphibian larval stage0.200000
stream0.200000
salamandra salamandra0.142857
LOWER IN pond0.142857
mucus0.076923
pond0.052632
larval stage0.028571
germany0.020408
intestine0.016393
skin0.011765
Fraction of annotations for the query sequences containing the term
TermScore
salamandra salamandra1.000000
fire salamander1.000000
germany1.000000
larval stage1.000000
amphibian larval stage1.000000
intestine0.692308
pond0.461538
stream0.384615
skin0.307692
mucus0.307692
LOWER IN stream0.307692
LOWER IN pond0.230769
Number of experiments associating the term to the sequence
TermScore
salamandra salamandra1.000000
fire salamander1.000000
germany1.000000
larval stage1.000000
amphibian larval stage1.000000
skin1.000000
mucus1.000000
pond1.000000
LOWER IN stream1.000000
stream1.000000
LOWER IN pond1.000000
intestine1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
149amnonhigher in larvae transferred to stream compared to pond ( high in stream compared to pond in salamandra salamandra fire salamander germany larval stage amphibian larval stage intestine )2017-04-24v41 / 3approvedNo
149amnonhigher in larvae transferred to pond compared to stream ( high in pond compared to stream in salamandra salamandra fire salamander germany larval stage amphibian larval stage intestine )2017-04-24v41 / 7approvedNo
149amnondominant salamandra salamandra, fire salamander, germany, larval stage, amphibian larval stage, intestine, stream2017-04-24v41 / 13approvedNo
149amnondominant salamandra salamandra, fire salamander, germany, larval stage, amphibian larval stage, skin, mucus2017-04-24v41 / 18approvedNo
149amnondominant salamandra salamandra, fire salamander, germany, larval stage, amphibian larval stage, intestine, pond2017-04-24v41 / 21approvedNo
149amnoncommon salamandra salamandra, fire salamander, germany, larval stage, amphibian larval stage, intestine, pond2017-04-24v41 / 31approvedNo
149amnonhigher in larvae ever in a pond (original or transferred) compared to only stream ( high in pond compared to stream in salamandra salamandra fire salamander germany larval stage amphibian larval stage intestine )2017-04-24v41 / 45approvedNo
149amnoncommon salamandra salamandra, fire salamander, germany, larval stage, amphibian larval stage, skin, mucus2017-04-24v41 / 49approvedNo
149amnoncommon salamandra salamandra, fire salamander, germany, larval stage, amphibian larval stage, intestine, stream2017-04-24v41 / 60approvedNo
149amnon high in pond compared to stream in salamandra salamandra fire salamander germany larval stage amphibian larval stage intestine 2017-04-24v41 / 103approvedNo
149amnon high in stream compared to pond in salamandra salamandra fire salamander germany larval stage amphibian larval stage intestine 2017-04-24v41 / 107approvedNo
149amnonhigher in larvae transferred to stream compared to pond ( high in stream compared to pond in salamandra salamandra fire salamander germany larval stage amphibian larval stage skin mucus )2017-04-24v41 / 117approvedNo
149amnonhigher in larvae transferred to pond compared to stream ( high in pond compared to stream in salamandra salamandra fire salamander germany larval stage amphibian larval stage skin mucus )2017-04-24v41 / 132approvedNo

Problems / suggestions? Please visit the dbBact forum