Experiment ID: 1355

Field Description
namerapid change of fecal microbiome and disappearance of clostridium difficile in a colonized infant after transition from breast milk to cow milk (5055705) - gpt-4o-mini-2024-07-18
srasrp079699
proj_id5055705
date_of_upload28/10/2025 11:45
doi10.1186/s40168-016-0198-6
modelgpt-4o-mini-2024-07-18

Annotations for experiment:

term enrichment score
TermScore
infant stage0.500000
11-month-old human stage0.200000
14-month-old human stage0.200000
8-month-old human stage0.200000
6-month-old human stage0.142857
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
11-month-old human stage0.500000
14-month-old human stage0.500000
8-month-old human stage0.500000
infant stage0.333333
6-month-old human stage0.166667
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
feces1.000000
infant stage1.000000
16-month-old human stage0.125000
11-month-old human stage0.125000
14-month-old human stage0.125000
8-month-old human stage0.125000
6-month-old human stage0.125000
5-month-old human stage0.125000
Number of experiments associating the term to the sequence
TermScore
16-month-old human stage1.000000
homo sapiens1.000000
feces1.000000
infant stage1.000000
11-month-old human stage1.000000
14-month-old human stage1.000000
8-month-old human stage1.000000
6-month-old human stage1.000000
5-month-old human stage1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1355naSamples from 5.5 Months Old Infant (dominant homo sapiens, 5-month-old human stage, feces, infant stage)2025-10-28v41 / 9pendingNo
1355naSamples from 14.5 Months Old Infant (dominant homo sapiens, feces, 14-month-old human stage, infant stage)2025-10-28v41 / 11pendingNo
1355naSamples from 6 Months Old Infant (dominant homo sapiens, feces, 6-month-old human stage, infant stage)2025-10-28v41 / 12pendingNo
1355naSamples from 8 Months Old Infant (dominant homo sapiens, 8-month-old human stage, feces, infant stage)2025-10-28v41 / 12pendingNo
1355naSamples from 11.75 Months Old Infant (dominant homo sapiens, feces, 11-month-old human stage, infant stage)2025-10-28v41 / 13pendingNo
1355naSamples from Human Milk Diet (dominant homo sapiens, feces, infant stage)2025-10-28v41 / 13pendingNo
1355naSamples from 16.75 Months Old Infant (dominant 16-month-old human stage, homo sapiens, feces, infant stage)2025-10-28v41 / 18pendingNo
1355naSamples from Cow Milk Diet (dominant homo sapiens, feces, infant stage)2025-10-28v41 / 19pendingNo
1355naSamples from Human Milk Diet (common homo sapiens, feces, infant stage)2025-10-28v41 / 37pendingNo
1355naSamples from 5.5 Months Old Infant (common homo sapiens, 5-month-old human stage, feces, infant stage)2025-10-28v41 / 39pendingNo
1355naSamples from 6 Months Old Infant (common homo sapiens, feces, 6-month-old human stage, infant stage)2025-10-28v41 / 44pendingNo
1355naSamples from Cow Milk Diet (common homo sapiens, feces, infant stage)2025-10-28v41 / 55pendingNo
1355naSamples from 8 Months Old Infant (common homo sapiens, 8-month-old human stage, feces, infant stage)2025-10-28v41 / 55pendingNo
1355naSamples from 14.5 Months Old Infant (common homo sapiens, feces, 14-month-old human stage, infant stage)2025-10-28v41 / 60pendingNo
1355naSamples from 11.75 Months Old Infant (common homo sapiens, feces, 11-month-old human stage, infant stage)2025-10-28v41 / 64pendingNo
1355naSamples from 16.75 Months Old Infant (common 16-month-old human stage, homo sapiens, feces, infant stage)2025-10-28v41 / 79pendingNo

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