Experiment ID: 1348

Field Description
nameemergence shapes the structure of the seed microbiota (4309697) - gpt-4o-mini-2024-07-18
proj_id4309697
sraerp006367
date_of_upload28/10/2025 11:44
doi10.1128/aem.03722-14
modelgpt-4o-mini-2024-07-18

Annotations for experiment:

term enrichment score
TermScore
solanum lycopersicum0.193548
Fraction of dbbact annotations with this term covered by the query
TermScore
solanum lycopersicum0.142857
Fraction of annotations for the query sequences containing the term
TermScore
beaucouzé, france1.000000
brassica rapa var. rapa0.350000
brassica oleracea var. capitata0.350000
solanum lycopersicum0.300000
LOWER IN brassica oleracea var. capitata0.050000
LOWER IN brassica rapa var. rapa0.050000
Number of experiments associating the term to the sequence
TermScore
beaucouzé, france1.000000
solanum lycopersicum1.000000
brassica rapa var. rapa1.000000
brassica oleracea var. capitata1.000000
LOWER IN brassica oleracea var. capitata1.000000
LOWER IN brassica rapa var. rapa1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1348naComparison of Brassica species at the germinating seed stage ( high in brassica oleracea var. capitata compared to brassica rapa var. rapa in beaucouzé, france )2025-10-28v41 / 2pendingNo
1348naSolanum lycopersicum Seedlings (dominant beaucouzé, france, solanum lycopersicum)2025-10-28v41 / 3pendingNo
1348naBrassica rapa var. rapa Germinating Seeds (dominant beaucouzé, france, brassica rapa var. rapa)2025-10-28v41 / 8pendingNo
1348naBrassica oleracea var. capitata Seedlings (dominant beaucouzé, france, brassica oleracea var. capitata)2025-10-28v41 / 9pendingNo
1348naComparison of Brassica species at the germinating seed stage ( high in brassica rapa var. rapa compared to brassica oleracea var. capitata in beaucouzé, france )2025-10-28v41 / 9pendingNo
1348naBrassica oleracea var. capitata Germinating Seeds (dominant beaucouzé, france, brassica oleracea var. capitata)2025-10-28v41 / 12pendingNo
1348naBrassica oleracea var. capitata Seedlings (common beaucouzé, france, brassica oleracea var. capitata)2025-10-28v41 / 12pendingNo
1348naBrassica rapa var. rapa Seedlings (dominant beaucouzé, france, brassica rapa var. rapa)2025-10-28v41 / 12pendingNo
1348naBrassica oleracea var. capitata Seeds (dominant beaucouzé, france, brassica oleracea var. capitata)2025-10-28v41 / 12pendingNo
1348naBrassica rapa var. rapa Seeds (dominant beaucouzé, france, brassica rapa var. rapa)2025-10-28v41 / 12pendingNo
1348naSolanum lycopersicum Seeds (dominant beaucouzé, france, solanum lycopersicum)2025-10-28v41 / 12pendingNo
1348naSolanum lycopersicum Germinating Seeds (dominant beaucouzé, france, solanum lycopersicum)2025-10-28v41 / 14pendingNo
1348naBrassica oleracea var. capitata Seeds (common beaucouzé, france, brassica oleracea var. capitata)2025-10-28v41 / 17pendingNo
1348naBrassica rapa var. rapa Seedlings (common beaucouzé, france, brassica rapa var. rapa)2025-10-28v41 / 21pendingNo
1348naBrassica rapa var. rapa Seeds (common beaucouzé, france, brassica rapa var. rapa)2025-10-28v41 / 22pendingNo
1348naSolanum lycopersicum Seeds (common beaucouzé, france, solanum lycopersicum)2025-10-28v41 / 28pendingNo
1348naBrassica oleracea var. capitata Germinating Seeds (common beaucouzé, france, brassica oleracea var. capitata)2025-10-28v41 / 32pendingNo
1348naSolanum lycopersicum Seedlings (common beaucouzé, france, solanum lycopersicum)2025-10-28v41 / 35pendingNo
1348naBrassica rapa var. rapa Germinating Seeds (common beaucouzé, france, brassica rapa var. rapa)2025-10-28v41 / 53pendingNo
1348naSolanum lycopersicum Germinating Seeds (common beaucouzé, france, solanum lycopersicum)2025-10-28v41 / 125pendingNo

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