Experiment ID: 1308

Field Description
namebifidobacteria or fiber protect against diet-induced microbiota- mediated colonic mucus deterioration (5764785) - gemini-2.0-flash
proj_id5764785
sraprjeb20367
date_of_upload26/10/2025 13:41
doi10.1016/j.chom.2017.11.004
modelgemini-2.0-flash

Annotations for experiment:

term enrichment score
TermScore
left colon0.400000
sweden0.117647
colon0.083333
mus musculus0.027027
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
left colon0.250000
sweden0.062500
colon0.043478
mus musculus0.013699
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
sweden1.000000
left colon1.000000
colon1.000000
mus musculus1.000000
feces1.000000
city of gothenburg1.000000
Number of experiments associating the term to the sequence
TermScore
sweden1.000000
left colon1.000000
colon1.000000
mus musculus1.000000
feces1.000000
city of gothenburg1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1308naMice fed Western Diet for 3 days - Distal colon content (dominant sweden, left colon, colon, mus musculus, feces, city of gothenburg)2025-10-26v41 / 15pendingNo
1308naMice fed Western Diet for 7 days - Distal colon content (dominant sweden, left colon, colon, mus musculus, feces, city of gothenburg)2025-10-26v41 / 15pendingNo
1308naMice fed Chow diet - Distal colon content (dominant sweden, left colon, colon, mus musculus, feces, city of gothenburg)2025-10-26v41 / 16pendingNo
1308naMice fed Western Diet for 0 days - Distal colon content (dominant sweden, left colon, colon, mus musculus, feces, city of gothenburg)2025-10-26v41 / 18pendingNo
1308naMice fed Western Diet for 14 days - Distal colon content (dominant sweden, left colon, colon, mus musculus, feces, city of gothenburg)2025-10-26v41 / 20pendingNo
1308naMice fed Western Diet for 1 day - Distal colon content (dominant sweden, left colon, colon, mus musculus, feces, city of gothenburg)2025-10-26v41 / 22pendingNo
1308naMice fed Western Diet for 3 days - Distal colon content (common sweden, left colon, colon, mus musculus, feces, city of gothenburg)2025-10-26v41 / 196pendingNo
1308naMice fed Western Diet for 7 days - Distal colon content (common sweden, left colon, colon, mus musculus, feces, city of gothenburg)2025-10-26v41 / 211pendingNo
1308naMice fed Western Diet for 14 days - Distal colon content (common sweden, left colon, colon, mus musculus, feces, city of gothenburg)2025-10-26v41 / 217pendingNo
1308naMice fed Western Diet for 0 days - Distal colon content (common sweden, left colon, colon, mus musculus, feces, city of gothenburg)2025-10-26v41 / 218pendingNo
1308naMice fed Chow diet - Distal colon content (common sweden, left colon, colon, mus musculus, feces, city of gothenburg)2025-10-26v41 / 298pendingNo
1308naMice fed Western Diet for 1 day - Distal colon content (common sweden, left colon, colon, mus musculus, feces, city of gothenburg)2025-10-26v41 / 322pendingNo

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