Experiment ID: 1307

Field Description
namethe shared microbiota of humans and companion animals as evaluated from staphylococcus carriage sites (4335418) - gemini-2.0-flash
proj_id4335418
srasrp042152
date_of_upload26/10/2025 13:41
doi10.1186/s40168-014-0052-7
modelgemini-2.0-flash

Annotations for experiment:

term enrichment score
TermScore
external naris0.370370
LOWER IN external naris0.142857
pair of nares0.121951
felis catus0.111111
LOWER IN pair of nares0.111111
oral cavity0.086957
canis lupus familiaris0.050000
human adult stage0.044444
united states of america0.006645
homo sapiens0.005155
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN external naris0.500000
external naris0.333333
LOWER IN pair of nares0.166667
felis catus0.083333
pair of nares0.071429
oral cavity0.050000
canis lupus familiaris0.027027
human adult stage0.023256
united states of america0.003333
homo sapiens0.002591
Fraction of annotations for the query sequences containing the term
TermScore
city of philadelphia1.000000
united states of america1.000000
philadelphia1.000000
human adult stage0.500000
human house0.500000
homo sapiens0.500000
internal naris0.416667
pair of nares0.416667
external naris0.416667
coagulase-positive staphylococci carriage0.333333
oral cavity0.333333
dog house0.333333
canis lupus familiaris0.333333
inguinal crease0.250000
cat house0.166667
felis catus0.166667
LOWER IN inguinal crease0.083333
LOWER IN internal naris0.083333
LOWER IN pair of nares0.083333
LOWER IN external naris0.083333
Number of experiments associating the term to the sequence
TermScore
coagulase-positive staphylococci carriage1.000000
internal naris1.000000
city of philadelphia1.000000
cat house1.000000
united states of america1.000000
pair of nares1.000000
philadelphia1.000000
felis catus1.000000
external naris1.000000
oral cavity1.000000
dog house1.000000
canis lupus familiaris1.000000
human adult stage1.000000
human house1.000000
homo sapiens1.000000
inguinal crease1.000000
LOWER IN inguinal crease1.000000
LOWER IN internal naris1.000000
LOWER IN pair of nares1.000000
LOWER IN external naris1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1307naHuman Nares vs Human Inguinal microbiota ( high in inguinal crease compared to internal naris pair of nares external naris in city of philadelphia human adult stage united states of america human house homo sapiens philadelphia )2025-10-26v41 / 4pendingNo
1307naHuman Nares vs Human Inguinal microbiota ( high in internal naris pair of nares external naris compared to inguinal crease in city of philadelphia human adult stage united states of america human house homo sapiens philadelphia )2025-10-26v41 / 5pendingNo
1307naHuman Inguinal Samples (dominant city of philadelphia, human adult stage, united states of america, human house, inguinal crease, homo sapiens, philadelphia)2025-10-26v41 / 7pendingNo
1307naCats CPS positive in nose (dominant coagulase-positive staphylococci carriage, internal naris, city of philadelphia, cat house, united states of america, pair of nares, philadelphia, felis catus, external naris)2025-10-26v41 / 11pendingNo
1307naHuman Nares Samples (dominant city of philadelphia, internal naris, human adult stage, united states of america, human house, homo sapiens, pair of nares, philadelphia, external naris)2025-10-26v41 / 12pendingNo
1307naDog Mouth Samples (dominant city of philadelphia, oral cavity, dog house, united states of america, canis lupus familiaris, philadelphia)2025-10-26v41 / 20pendingNo
1307naDogs CPS positive in mouth (dominant coagulase-positive staphylococci carriage, city of philadelphia, oral cavity, dog house, united states of america, canis lupus familiaris, philadelphia)2025-10-26v41 / 21pendingNo
1307naHuman Inguinal Samples (common city of philadelphia, human adult stage, united states of america, human house, inguinal crease, homo sapiens, philadelphia)2025-10-26v41 / 27pendingNo
1307naHuman Nares Samples (common city of philadelphia, internal naris, human adult stage, united states of america, human house, homo sapiens, pair of nares, philadelphia, external naris)2025-10-26v41 / 40pendingNo
1307naDog Mouth Samples (common city of philadelphia, oral cavity, dog house, united states of america, canis lupus familiaris, philadelphia)2025-10-26v41 / 75pendingNo
1307naDogs CPS positive in mouth (common coagulase-positive staphylococci carriage, city of philadelphia, oral cavity, dog house, united states of america, canis lupus familiaris, philadelphia)2025-10-26v41 / 96pendingNo
1307naCats CPS positive in nose (common coagulase-positive staphylococci carriage, internal naris, city of philadelphia, cat house, united states of america, pair of nares, philadelphia, felis catus, external naris)2025-10-26v41 / 277pendingNo

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