Experiment ID: 1304

Field Description
namegut-microbiota-based ensemble model predicts prognosis of pediatric inflammatory bowel disease (11650326) - gemini-2.0-flash
proj_id11650326
sraprjna917086
date_of_upload26/10/2025 13:40
doi10.1016/j.isci.2024.111442
modelgemini-2.0-flash

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
seoul0.250000
irritable bowel syndrome0.166667
LOWER IN irritable bowel syndrome0.166667
inflammatory bowel disease0.111111
LOWER IN inflammatory bowel disease0.111111
adolescent stage0.076923
LOWER IN ileum0.066667
LOWER IN colon0.055556
south korea0.052632
ileum0.052632
LOWER IN crohn's disease0.050000
LOWER IN ulcerative colitis0.047619
ulcerative colitis0.045455
colon0.043478
crohn's disease0.043478
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
seoul1.000000
south korea1.000000
feces1.000000
adolescent stage1.000000
colon0.461538
control0.230769
ulcerative colitis0.192308
inflammatory bowel disease0.192308
ileum0.192308
crohn's disease0.192308
LOWER IN colon0.153846
LOWER IN control0.153846
irritable bowel syndrome0.115385
tumor necrosis factor-alpha0.115385
LOWER IN crohn's disease0.038462
LOWER IN ileum0.038462
LOWER IN tumor necrosis factor-alpha0.038462
LOWER IN inflammatory bowel disease0.038462
LOWER IN ulcerative colitis0.038462
LOWER IN irritable bowel syndrome0.038462
Number of experiments associating the term to the sequence
TermScore
control1.000000
LOWER IN colon1.000000
homo sapiens1.000000
seoul1.000000
south korea1.000000
feces1.000000
adolescent stage1.000000
LOWER IN crohn's disease1.000000
LOWER IN ileum1.000000
irritable bowel syndrome1.000000
ulcerative colitis1.000000
colon1.000000
inflammatory bowel disease1.000000
tumor necrosis factor-alpha1.000000
ileum1.000000
crohn's disease1.000000
LOWER IN tumor necrosis factor-alpha1.000000
LOWER IN inflammatory bowel disease1.000000
LOWER IN control1.000000
LOWER IN ulcerative colitis1.000000
LOWER IN irritable bowel syndrome1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1304naUC (all disease states) vs Healthy Controls ( high in ulcerative colitis colon compared to control in homo sapiens seoul south korea feces adolescent stage )2025-10-26v31 / 5pendingNo
1304naPatients on Anti-TNF alpha therapy vs Healthy Controls ( high in tumor necrosis factor-alpha inflammatory bowel disease compared to control in homo sapiens seoul south korea feces adolescent stage )2025-10-26v31 / 6pendingNo
1304naIBD (CD & UC, all disease states) vs FGID ( high in colon compared to irritable bowel syndrome in homo sapiens seoul south korea feces adolescent stage )2025-10-26v31 / 7pendingNo
1304naUC (all disease states) vs Healthy Controls ( high in control compared to ulcerative colitis colon in homo sapiens seoul south korea feces adolescent stage )2025-10-26v31 / 10pendingNo
1304naUC Active (dominant homo sapiens, south korea, seoul, feces, ulcerative colitis, adolescent stage, colon)2025-10-26v31 / 16pendingNo
1304naIBD (CD & UC, all disease states) vs Healthy Controls ( high in colon compared to control in homo sapiens seoul south korea feces adolescent stage )2025-10-26v31 / 17pendingNo
1304naFunctional Gastrointestinal Disorders (FGID) (dominant homo sapiens, irritable bowel syndrome, seoul, south korea, feces, adolescent stage)2025-10-26v31 / 18pendingNo
1304naPatients on Anti-TNF alpha therapy (dominant homo sapiens, tumor necrosis factor-alpha, seoul, south korea, feces, inflammatory bowel disease, adolescent stage)2025-10-26v31 / 19pendingNo
1304naHealthy Controls (dominant homo sapiens, seoul, south korea, feces, control, adolescent stage)2025-10-26v31 / 20pendingNo
1304naCD (all disease states) vs Healthy Controls ( high in crohn's disease ileum colon compared to control in homo sapiens seoul south korea feces adolescent stage )2025-10-26v31 / 20pendingNo
1304naUC Remission (dominant homo sapiens, south korea, seoul, feces, ulcerative colitis, adolescent stage, colon)2025-10-26v31 / 21pendingNo
1304naCD Remission (dominant homo sapiens, south korea, seoul, feces, ileum, crohn's disease, adolescent stage, colon)2025-10-26v31 / 24pendingNo
1304naCalprotectin > 2000 (dominant homo sapiens, seoul, south korea, feces, inflammatory bowel disease, adolescent stage)2025-10-26v31 / 26pendingNo
1304naCD Active (common homo sapiens, south korea, seoul, feces, ileum, crohn's disease, adolescent stage, colon)2025-10-26v31 / 28pendingNo
1304naCD Active (dominant homo sapiens, south korea, seoul, feces, ileum, crohn's disease, adolescent stage, colon)2025-10-26v31 / 28pendingNo
1304naPatients on Anti-TNF alpha therapy vs Healthy Controls ( high in control compared to tumor necrosis factor-alpha inflammatory bowel disease in homo sapiens seoul south korea feces adolescent stage )2025-10-26v31 / 29pendingNo
1304naCD Remission (common homo sapiens, south korea, seoul, feces, ileum, crohn's disease, adolescent stage, colon)2025-10-26v31 / 32pendingNo
1304naUC Active (common homo sapiens, south korea, seoul, feces, ulcerative colitis, adolescent stage, colon)2025-10-26v31 / 33pendingNo
1304naPatients on Anti-TNF alpha therapy (common homo sapiens, tumor necrosis factor-alpha, seoul, south korea, feces, inflammatory bowel disease, adolescent stage)2025-10-26v31 / 36pendingNo
1304naCalprotectin > 2000 (common homo sapiens, seoul, south korea, feces, inflammatory bowel disease, adolescent stage)2025-10-26v31 / 43pendingNo
1304naUC Remission (common homo sapiens, south korea, seoul, feces, ulcerative colitis, adolescent stage, colon)2025-10-26v31 / 47pendingNo
1304naFunctional Gastrointestinal Disorders (FGID) (common homo sapiens, irritable bowel syndrome, seoul, south korea, feces, adolescent stage)2025-10-26v31 / 51pendingNo
1304naIBD (CD & UC, all disease states) vs FGID ( high in irritable bowel syndrome compared to colon in homo sapiens seoul south korea feces adolescent stage )2025-10-26v31 / 51pendingNo
1304naHealthy Controls (common homo sapiens, seoul, south korea, feces, control, adolescent stage)2025-10-26v31 / 61pendingNo
1304naCD (all disease states) vs Healthy Controls ( high in control compared to crohn's disease ileum colon in homo sapiens seoul south korea feces adolescent stage )2025-10-26v31 / 92pendingNo
1304naIBD (CD & UC, all disease states) vs Healthy Controls ( high in control compared to colon in homo sapiens seoul south korea feces adolescent stage )2025-10-26v31 / 94pendingNo

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