Experiment ID: 1299

Field Description
nameimpaired gut microbiota-mediated short-chain fatty acid production precedes morbidity and mortality in people with hiv (nihms-1948184) - gpt-5
proj_idnihms-1948184
sraprjna994573
date_of_upload26/10/2025 13:40
doi10.1016/j.celrep.2023.113336
modelgpt-5

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN antiretroviral therapy0.500000
LOWER IN human immunodeficiency virus infectious disease0.500000
antiretroviral therapy0.500000
human immunodeficiency virus infectious disease0.333333
human middle aged stage0.250000
human aged stage0.250000
colon0.043478
male0.020000
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Exp. ID User ID Description Date Region Sequences Status Flag
1299naNormal BMI (22–26): PWH vs HIV-negative ( high in antiretroviral therapy human immunodeficiency virus infectious disease compared to control in human middle aged stage human aged stage human house normal body mass index colon homo sapiens amsterdam, netherlands feces )2025-10-26v41 / 2pendingNo
1299naOlder adult males (60–70): PWH vs HIV-negative ( high in antiretroviral therapy human immunodeficiency virus infectious disease compared to control in 65-year-old human stage 63-year-old human stage human aged stage human house 70-year-old human stage male 62-year-old human stage 64-year-old human stage 69-year-old human stage colon 61-year-old human stage 67-year-old human stage 68-year-old human stage 66-year-old human stage homo sapiens 60-year-old human stage amsterdam, netherlands feces )2025-10-26v41 / 3pendingNo
1299naPWH vs HIV-negative (Amsterdam, stool; overall cohort) ( high in antiretroviral therapy human immunodeficiency virus infectious disease compared to control in human middle aged stage human aged stage human house colon homo sapiens amsterdam, netherlands feces )2025-10-26v41 / 15pendingNo
1299naOlder adult male PWH (age 60–70) stool samples (dominant human house, 62-year-old human stage, 64-year-old human stage, colon, 61-year-old human stage, 67-year-old human stage, human immunodeficiency virus infectious disease, 70-year-old human stage, 66-year-old human stage, feces, human aged stage, male, antiretroviral therapy, 60-year-old human stage, 65-year-old human stage, 63-year-old human stage, 69-year-old human stage, 68-year-old human stage, homo sapiens, amsterdam, netherlands)2025-10-26v41 / 20pendingNo
1299naNormal BMI PWH (BMI 22–26) stool samples (dominant human middle aged stage, human immunodeficiency virus infectious disease, human aged stage, human house, normal body mass index, antiretroviral therapy, colon, homo sapiens, amsterdam, netherlands, feces)2025-10-26v41 / 21pendingNo
1299naPWH (HIV-positive) stool samples (dominant human middle aged stage, human immunodeficiency virus infectious disease, human aged stage, human house, antiretroviral therapy, colon, homo sapiens, amsterdam, netherlands, feces)2025-10-26v41 / 22pendingNo
1299naHIV-negative stool samples (matched cohort subset location) (dominant human middle aged stage, human aged stage, human house, colon, homo sapiens, control, amsterdam, netherlands, feces)2025-10-26v41 / 22pendingNo
1299naOlder adult male HIV-negative (age 60–70) stool samples (dominant human house, 62-year-old human stage, 64-year-old human stage, colon, 61-year-old human stage, 67-year-old human stage, 70-year-old human stage, 66-year-old human stage, control, feces, human aged stage, male, 60-year-old human stage, 65-year-old human stage, 63-year-old human stage, 69-year-old human stage, 68-year-old human stage, homo sapiens, amsterdam, netherlands)2025-10-26v41 / 23pendingNo
1299naNormal BMI HIV-negative (BMI 22–26) stool samples (dominant human middle aged stage, human aged stage, human house, normal body mass index, colon, homo sapiens, control, amsterdam, netherlands, feces)2025-10-26v41 / 23pendingNo
1299naOlder adult males (60–70): PWH vs HIV-negative ( high in control compared to antiretroviral therapy human immunodeficiency virus infectious disease in 65-year-old human stage 63-year-old human stage human aged stage human house 70-year-old human stage male 62-year-old human stage 64-year-old human stage 69-year-old human stage colon 61-year-old human stage 67-year-old human stage 68-year-old human stage 66-year-old human stage homo sapiens 60-year-old human stage amsterdam, netherlands feces )2025-10-26v41 / 52pendingNo
1299naNormal BMI (22–26): PWH vs HIV-negative ( high in control compared to antiretroviral therapy human immunodeficiency virus infectious disease in human middle aged stage human aged stage human house normal body mass index colon homo sapiens amsterdam, netherlands feces )2025-10-26v41 / 92pendingNo
1299naNormal BMI PWH (BMI 22–26) stool samples (common human middle aged stage, human immunodeficiency virus infectious disease, human aged stage, human house, normal body mass index, antiretroviral therapy, colon, homo sapiens, amsterdam, netherlands, feces)2025-10-26v41 / 94pendingNo
1299naPWH (HIV-positive) stool samples (common human middle aged stage, human immunodeficiency virus infectious disease, human aged stage, human house, antiretroviral therapy, colon, homo sapiens, amsterdam, netherlands, feces)2025-10-26v41 / 95pendingNo
1299naOlder adult male PWH (age 60–70) stool samples (common human house, 62-year-old human stage, 64-year-old human stage, colon, 61-year-old human stage, 67-year-old human stage, human immunodeficiency virus infectious disease, 70-year-old human stage, 66-year-old human stage, feces, human aged stage, male, antiretroviral therapy, 60-year-old human stage, 65-year-old human stage, 63-year-old human stage, 69-year-old human stage, 68-year-old human stage, homo sapiens, amsterdam, netherlands)2025-10-26v41 / 103pendingNo
1299naOlder adult male HIV-negative (age 60–70) stool samples (common human house, 62-year-old human stage, 64-year-old human stage, colon, 61-year-old human stage, 67-year-old human stage, 70-year-old human stage, 66-year-old human stage, control, feces, human aged stage, male, 60-year-old human stage, 65-year-old human stage, 63-year-old human stage, 69-year-old human stage, 68-year-old human stage, homo sapiens, amsterdam, netherlands)2025-10-26v41 / 148pendingNo
1299naHIV-negative stool samples (matched cohort subset location) (common human middle aged stage, human aged stage, human house, colon, homo sapiens, control, amsterdam, netherlands, feces)2025-10-26v41 / 149pendingNo
1299naNormal BMI HIV-negative (BMI 22–26) stool samples (common human middle aged stage, human aged stage, human house, normal body mass index, colon, homo sapiens, control, amsterdam, netherlands, feces)2025-10-26v41 / 150pendingNo
1299naPWH vs HIV-negative (Amsterdam, stool; overall cohort) ( high in control compared to antiretroviral therapy human immunodeficiency virus infectious disease in human middle aged stage human aged stage human house colon homo sapiens amsterdam, netherlands feces )2025-10-26v41 / 196pendingNo

Problems / suggestions? Please visit the dbBact forum