Experiment ID: 1296

Field Description
namethe shared microbiota of humans and companion animals as evaluated from staphylococcus carriage sites (4335418) - gpt-5
proj_id4335418
srasrp042152
date_of_upload26/10/2025 13:39
doi10.1186/s40168-014-0052-7
modelgpt-5

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN nose1.000000
LOWER IN skin of body1.000000
nose0.500000
LOWER IN external naris0.500000
LOWER IN felis catus0.500000
LOWER IN homo sapiens0.500000
LOWER IN axilla0.500000
external naris0.333333
skin of body0.333333
LOWER IN canis lupus familiaris0.166667
LOWER IN pair of nares0.166667
LOWER IN oral cavity0.166667
axilla0.166667
LOWER IN mouth0.142857
felis catus0.083333
pair of nares0.071429
oral cavity0.050000
mouth0.040000
canis lupus familiaris0.027027
united states of america0.003333
homo sapiens0.002591
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
philadelphia1.000000
city of philadelphia1.000000
internal naris0.516129
nose0.516129
external naris0.516129
pair of nares0.516129
homo sapiens0.516129
companion animal0.483871
household0.290323
mouth0.258065
oral cavity0.258065
felis catus0.225806
canis lupus familiaris0.225806
skin of body0.225806
axilla0.225806
no pet exposure0.161290
no pets in household0.161290
pet exposure0.129032
pet-owning household0.129032
LOWER IN pair of nares0.096774
LOWER IN external naris0.096774
LOWER IN internal naris0.096774
LOWER IN nose0.096774
LOWER IN mouth0.064516
LOWER IN oral cavity0.064516
LOWER IN canis lupus familiaris0.032258
LOWER IN felis catus0.032258
LOWER IN companion animal0.032258
LOWER IN homo sapiens0.032258
LOWER IN pet exposure0.032258
LOWER IN pet-owning household0.032258
LOWER IN axilla0.032258
LOWER IN skin of body0.032258
Exp. ID User ID Description Date Region Sequences Status Flag
1296naHuman nares vs human inguinal/axilla skin microbiota (site-specific communities) ( high in pair of nares external naris internal naris nose compared to axilla skin of body in philadelphia united states of america homo sapiens city of philadelphia )2025-10-26v41 / 4pendingNo
1296naHuman nares vs human inguinal/axilla skin microbiota (site-specific communities) ( high in axilla skin of body compared to pair of nares external naris internal naris nose in philadelphia united states of america homo sapiens city of philadelphia )2025-10-26v41 / 4pendingNo
1296naHumans without pets in household (inguinal/axilla) (dominant no pet exposure, skin of body, united states of america, no pets in household, household, axilla, philadelphia, homo sapiens, city of philadelphia)2025-10-26v41 / 6pendingNo
1296naHuman inguinal/axilla microbiota (skin carriage site) (dominant skin of body, united states of america, philadelphia, axilla, homo sapiens, city of philadelphia)2025-10-26v41 / 7pendingNo
1296naHumans in pet-owning households (inguinal/axilla) (dominant skin of body, united states of america, pet exposure, pet-owning household, household, axilla, philadelphia, homo sapiens, city of philadelphia)2025-10-26v41 / 8pendingNo
1296naEffect of pet ownership on human nasal microbiota ( high in no pet exposure no pets in household compared to pet exposure pet-owning household in united states of america internal naris nose household philadelphia external naris homo sapiens pair of nares city of philadelphia )2025-10-26v41 / 9pendingNo
1296naDog nasal microbiota (nares carriage site) (dominant united states of america, canis lupus familiaris, internal naris, nose, philadelphia, external naris, pair of nares, companion animal, city of philadelphia)2025-10-26v41 / 11pendingNo
1296naCat nasal microbiota (nares carriage site) (dominant felis catus, united states of america, internal naris, nose, philadelphia, external naris, pair of nares, companion animal, city of philadelphia)2025-10-26v41 / 11pendingNo
1296naHuman nasal microbiota (nares carriage site) (dominant united states of america, internal naris, nose, philadelphia, external naris, homo sapiens, pair of nares, city of philadelphia)2025-10-26v41 / 12pendingNo
1296naHumans in pet-owning households (nares) (dominant united states of america, pet exposure, internal naris, nose, pet-owning household, household, philadelphia, external naris, homo sapiens, pair of nares, city of philadelphia)2025-10-26v41 / 13pendingNo
1296naHumans without pets in household (nares) (dominant no pet exposure, united states of america, internal naris, nose, no pets in household, household, philadelphia, external naris, homo sapiens, pair of nares, city of philadelphia)2025-10-26v41 / 15pendingNo
1296naDog nasal microbiota (nares carriage site) (common united states of america, canis lupus familiaris, internal naris, nose, philadelphia, external naris, pair of nares, companion animal, city of philadelphia)2025-10-26v41 / 17pendingNo
1296naCat oral microbiota (mouth carriage site) (dominant mouth, felis catus, united states of america, oral cavity, philadelphia, companion animal, city of philadelphia)2025-10-26v41 / 19pendingNo
1296naDog oral microbiota (mouth carriage site) (dominant mouth, united states of america, canis lupus familiaris, oral cavity, philadelphia, companion animal, city of philadelphia)2025-10-26v41 / 20pendingNo
1296naHumans in pet-owning households (inguinal/axilla) (common skin of body, united states of america, pet exposure, pet-owning household, household, axilla, philadelphia, homo sapiens, city of philadelphia)2025-10-26v41 / 23pendingNo
1296naCross-species comparison of nasal microbiota (human vs dog vs cat) ( high in companion animal compared to homo sapiens in united states of america internal naris nose philadelphia external naris pair of nares city of philadelphia )2025-10-26v41 / 23pendingNo
1296naHuman inguinal/axilla microbiota (skin carriage site) (common skin of body, united states of america, philadelphia, axilla, homo sapiens, city of philadelphia)2025-10-26v41 / 27pendingNo
1296naHumans in pet-owning households (nares) (common united states of america, pet exposure, internal naris, nose, pet-owning household, household, philadelphia, external naris, homo sapiens, pair of nares, city of philadelphia)2025-10-26v41 / 35pendingNo
1296naHuman nasal microbiota (nares carriage site) (common united states of america, internal naris, nose, philadelphia, external naris, homo sapiens, pair of nares, city of philadelphia)2025-10-26v41 / 40pendingNo
1296naCross-species comparison of nasal microbiota (human vs dog vs cat) ( high in homo sapiens compared to companion animal in united states of america internal naris nose philadelphia external naris pair of nares city of philadelphia )2025-10-26v41 / 48pendingNo
1296naNasal vs oral niches within companion animals (dogs and cats separately) ( high in pair of nares external naris internal naris nose compared to mouth oral cavity in united states of america canis lupus familiaris philadelphia companion animal city of philadelphia )2025-10-26v41 / 67pendingNo
1296naCross-species comparison of oral microbiota (dog vs cat) ( high in canis lupus familiaris compared to felis catus in mouth united states of america oral cavity philadelphia companion animal city of philadelphia )2025-10-26v41 / 72pendingNo
1296naHumans without pets in household (nares) (common no pet exposure, united states of america, internal naris, nose, no pets in household, household, philadelphia, external naris, homo sapiens, pair of nares, city of philadelphia)2025-10-26v41 / 73pendingNo
1296naDog oral microbiota (mouth carriage site) (common mouth, united states of america, canis lupus familiaris, oral cavity, philadelphia, companion animal, city of philadelphia)2025-10-26v41 / 75pendingNo
1296naNasal vs oral niches within companion animals (cats) ( high in mouth oral cavity compared to pair of nares external naris internal naris nose in felis catus united states of america philadelphia companion animal city of philadelphia )2025-10-26v41 / 75pendingNo
1296naHumans without pets in household (inguinal/axilla) (common no pet exposure, skin of body, united states of america, no pets in household, household, axilla, philadelphia, homo sapiens, city of philadelphia)2025-10-26v41 / 81pendingNo
1296naNasal vs oral niches within companion animals (cats) ( high in pair of nares external naris internal naris nose compared to mouth oral cavity in felis catus united states of america philadelphia companion animal city of philadelphia )2025-10-26v41 / 122pendingNo
1296naCat nasal microbiota (nares carriage site) (common felis catus, united states of america, internal naris, nose, philadelphia, external naris, pair of nares, companion animal, city of philadelphia)2025-10-26v41 / 125pendingNo
1296naNasal vs oral niches within companion animals (dogs and cats separately) ( high in mouth oral cavity compared to pair of nares external naris internal naris nose in united states of america canis lupus familiaris philadelphia companion animal city of philadelphia )2025-10-26v41 / 125pendingNo
1296naCat oral microbiota (mouth carriage site) (common mouth, felis catus, united states of america, oral cavity, philadelphia, companion animal, city of philadelphia)2025-10-26v41 / 130pendingNo
1296naCross-species comparison of oral microbiota (dog vs cat) ( high in felis catus compared to canis lupus familiaris in mouth united states of america oral cavity philadelphia companion animal city of philadelphia )2025-10-26v41 / 201pendingNo

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