Experiment ID: 1293

Field Description
namegut-microbiota-based ensemble model predicts prognosis of pediatric inflammatory bowel disease (11650326) - gpt-5
proj_id11650326
sraprjna917086
date_of_upload26/10/2025 13:38
doi10.1016/j.isci.2024.111442
modelgpt-5

Annotations for experiment:

term enrichment score
TermScore
active disease0.478261
left colon0.250000
irritable bowel syndrome0.200000
inflammatory bowel disease0.193548
adolescent stage0.142857
south korea0.100000
LOWER IN inflammatory bowel disease0.095238
ileum0.093458
colon0.082192
ulcerative colitis0.081967
crohn's disease0.078740
LOWER IN active disease0.076923
LOWER IN colon0.066667
control0.008795
LOWER IN control0.008621
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN active disease0.500000
active disease0.500000
left colon0.250000
irritable bowel syndrome0.166667
LOWER IN inflammatory bowel disease0.111111
inflammatory bowel disease0.111111
adolescent stage0.076923
LOWER IN colon0.055556
south korea0.052632
ileum0.052632
ulcerative colitis0.045455
colon0.043478
crohn's disease0.043478
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
south korea1.000000
human gut1.000000
metropolitan city (republic of korea)1.000000
adolescent stage1.000000
homo sapiens1.000000
feces1.000000
colon0.750000
inflammatory bowel disease0.750000
active disease0.458333
control0.416667
ulcerative colitis0.416667
ileum0.416667
crohn's disease0.416667
irritable bowel syndrome0.250000
left colon0.250000
clinical remission0.208333
LOWER IN colon0.083333
LOWER IN inflammatory bowel disease0.083333
LOWER IN control0.083333
LOWER IN active disease0.041667
LOWER IN clinical remission0.041667
Number of experiments associating the term to the sequence
TermScore
south korea1.000000
control1.000000
human gut1.000000
metropolitan city (republic of korea)1.000000
adolescent stage1.000000
homo sapiens1.000000
feces1.000000
LOWER IN colon1.000000
LOWER IN inflammatory bowel disease1.000000
LOWER IN active disease1.000000
irritable bowel syndrome1.000000
colon1.000000
left colon1.000000
inflammatory bowel disease1.000000
clinical remission1.000000
ulcerative colitis1.000000
active disease1.000000
ileum1.000000
crohn's disease1.000000
LOWER IN control1.000000
LOWER IN clinical remission1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1293naRemission IBD (CD_remission + UC_remission) vs Controls (HC + FGD) ( high in colon inflammatory bowel disease clinical remission compared to control in south korea human gut metropolitan city (republic of korea) adolescent stage homo sapiens feces )2025-10-26v31 / 15pendingNo
1293naUlcerative colitis - Active (stool, pediatric, Korea) (dominant south korea, colon, left colon, human gut, inflammatory bowel disease, active disease, metropolitan city (republic of korea), adolescent stage, homo sapiens, ulcerative colitis, feces)2025-10-26v31 / 16pendingNo
1293naFunctional GI disorder controls (stool, pediatric, Korea) (dominant south korea, control, human gut, metropolitan city (republic of korea), adolescent stage, homo sapiens, irritable bowel syndrome, feces)2025-10-26v31 / 18pendingNo
1293naActive IBD (CD_active + UC_active) vs Controls (HC + FGD) (dominant south korea, colon, human gut, control, inflammatory bowel disease, ileum, crohn's disease, active disease, metropolitan city (republic of korea), adolescent stage, homo sapiens, ulcerative colitis, irritable bowel syndrome, feces)2025-10-26v31 / 19pendingNo
1293naRemission IBD (CD_remission + UC_remission) vs Controls (HC + FGD) ( high in control compared to colon inflammatory bowel disease clinical remission in south korea human gut metropolitan city (republic of korea) adolescent stage homo sapiens feces )2025-10-26v31 / 19pendingNo
1293naHealthy controls (stool, pediatric, Korea) (dominant south korea, control, human gut, metropolitan city (republic of korea), adolescent stage, homo sapiens, feces)2025-10-26v31 / 20pendingNo
1293naUC by activity (Active vs Remission) (dominant south korea, colon, left colon, human gut, inflammatory bowel disease, active disease, metropolitan city (republic of korea), adolescent stage, homo sapiens, ulcerative colitis, feces)2025-10-26v31 / 20pendingNo
1293naRemission IBD (CD_remission + UC_remission) vs Controls (HC + FGD) (dominant south korea, colon, human gut, control, inflammatory bowel disease, ileum, crohn's disease, metropolitan city (republic of korea), adolescent stage, homo sapiens, ulcerative colitis, irritable bowel syndrome, feces)2025-10-26v31 / 20pendingNo
1293naUlcerative colitis - Remission (stool, pediatric, Korea) (dominant south korea, colon, left colon, human gut, inflammatory bowel disease, clinical remission, metropolitan city (republic of korea), adolescent stage, homo sapiens, ulcerative colitis, feces)2025-10-26v31 / 21pendingNo
1293naCrohn's disease by activity (Active vs Remission) (dominant south korea, colon, human gut, inflammatory bowel disease, ileum, crohn's disease, active disease, metropolitan city (republic of korea), adolescent stage, homo sapiens, feces)2025-10-26v31 / 23pendingNo
1293naCrohn's disease - Remission (stool, pediatric, Korea) (dominant south korea, colon, human gut, inflammatory bowel disease, ileum, crohn's disease, clinical remission, metropolitan city (republic of korea), adolescent stage, homo sapiens, feces)2025-10-26v31 / 24pendingNo
1293naCrohn's disease - Active (stool, pediatric, Korea) (common south korea, colon, human gut, inflammatory bowel disease, ileum, crohn's disease, active disease, metropolitan city (republic of korea), adolescent stage, homo sapiens, feces)2025-10-26v31 / 28pendingNo
1293naCrohn's disease - Active (stool, pediatric, Korea) (dominant south korea, colon, human gut, inflammatory bowel disease, ileum, crohn's disease, active disease, metropolitan city (republic of korea), adolescent stage, homo sapiens, feces)2025-10-26v31 / 28pendingNo
1293naCrohn's disease by activity (Active vs Remission) (common south korea, colon, human gut, inflammatory bowel disease, ileum, crohn's disease, active disease, metropolitan city (republic of korea), adolescent stage, homo sapiens, feces)2025-10-26v31 / 30pendingNo
1293naCrohn's disease - Remission (stool, pediatric, Korea) (common south korea, colon, human gut, inflammatory bowel disease, ileum, crohn's disease, clinical remission, metropolitan city (republic of korea), adolescent stage, homo sapiens, feces)2025-10-26v31 / 32pendingNo
1293naUlcerative colitis - Active (stool, pediatric, Korea) (common south korea, colon, left colon, human gut, inflammatory bowel disease, active disease, metropolitan city (republic of korea), adolescent stage, homo sapiens, ulcerative colitis, feces)2025-10-26v31 / 33pendingNo
1293naActive IBD (CD_active + UC_active) vs Controls (HC + FGD) ( high in colon inflammatory bowel disease active disease compared to control in south korea human gut metropolitan city (republic of korea) adolescent stage homo sapiens feces )2025-10-26v31 / 33pendingNo
1293naActive IBD (CD_active + UC_active) vs Controls (HC + FGD) (common south korea, colon, human gut, control, inflammatory bowel disease, ileum, crohn's disease, active disease, metropolitan city (republic of korea), adolescent stage, homo sapiens, ulcerative colitis, irritable bowel syndrome, feces)2025-10-26v31 / 38pendingNo
1293naUC by activity (Active vs Remission) (common south korea, colon, left colon, human gut, inflammatory bowel disease, active disease, metropolitan city (republic of korea), adolescent stage, homo sapiens, ulcerative colitis, feces)2025-10-26v31 / 44pendingNo
1293naRemission IBD (CD_remission + UC_remission) vs Controls (HC + FGD) (common south korea, colon, human gut, control, inflammatory bowel disease, ileum, crohn's disease, metropolitan city (republic of korea), adolescent stage, homo sapiens, ulcerative colitis, irritable bowel syndrome, feces)2025-10-26v31 / 44pendingNo
1293naUlcerative colitis - Remission (stool, pediatric, Korea) (common south korea, colon, left colon, human gut, inflammatory bowel disease, clinical remission, metropolitan city (republic of korea), adolescent stage, homo sapiens, ulcerative colitis, feces)2025-10-26v31 / 47pendingNo
1293naFunctional GI disorder controls (stool, pediatric, Korea) (common south korea, control, human gut, metropolitan city (republic of korea), adolescent stage, homo sapiens, irritable bowel syndrome, feces)2025-10-26v31 / 51pendingNo
1293naHealthy controls (stool, pediatric, Korea) (common south korea, control, human gut, metropolitan city (republic of korea), adolescent stage, homo sapiens, feces)2025-10-26v31 / 61pendingNo
1293naActive IBD (CD_active + UC_active) vs Controls (HC + FGD) ( high in control compared to colon inflammatory bowel disease active disease in south korea human gut metropolitan city (republic of korea) adolescent stage homo sapiens feces )2025-10-26v31 / 61pendingNo

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