Experiment ID: 1263

Field Description
namevaginal and anal microbiome during chlamydia trachomatis infections (8539191) - gemini-2.5-flash
proj_id8539191
sraprjna764037
date_of_upload22/10/2025 02:04
doi10.3390/pathogens10101347
modelgemini-2.5-flash

Annotations for experiment:

term enrichment score
TermScore
non-pregnant0.500000
bologna0.400000
caucasian0.285714
LOWER IN vagina0.206897
young adult stage0.200000
hospital0.181818
vagina0.112994
italy0.060606
female0.024691
control0.008822
LOWER IN control0.008439
homo sapiens0.005168
Fraction of dbbact annotations with this term covered by the query
TermScore
non-pregnant0.333333
LOWER IN vagina0.250000
bologna0.250000
caucasian0.166667
young adult stage0.111111
hospital0.100000
vagina0.062500
italy0.031250
female0.012500
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
female1.000000
hospital1.000000
caucasian1.000000
italy1.000000
bologna1.000000
non-pregnant1.000000
young adult stage1.000000
no antibiotic use1.000000
unsafe sexual intercourse1.000000
sexually active1.000000
control0.588235
vagina0.588235
anus0.529412
chlamydia0.529412
LOWER IN vagina0.176471
LOWER IN anus0.176471
LOWER IN chlamydia0.117647
LOWER IN control0.058824
Number of experiments associating the term to the sequence
TermScore
anus1.000000
LOWER IN vagina1.000000
homo sapiens1.000000
control1.000000
female1.000000
hospital1.000000
caucasian1.000000
italy1.000000
chlamydia1.000000
bologna1.000000
non-pregnant1.000000
young adult stage1.000000
no antibiotic use1.000000
unsafe sexual intercourse1.000000
sexually active1.000000
vagina1.000000
LOWER IN anus1.000000
LOWER IN chlamydia1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1263naImpact of Chlamydia infection on the vaginal microbiome ( high in control compared to chlamydia in homo sapiens female hospital vagina caucasian italy bologna non-pregnant young adult stage no antibiotic use unsafe sexual intercourse sexually active )2025-10-22v31 / 2pendingNo
1263naOverall impact of Chlamydia infection across both body sites ( high in chlamydia compared to control in homo sapiens female hospital vagina caucasian italy anus bologna non-pregnant young adult stage no antibiotic use unsafe sexual intercourse sexually active )2025-10-22v31 / 11pendingNo
1263naCT-negative Vaginal Microbiome (dominant homo sapiens, control, female, hospital, vagina, caucasian, italy, bologna, non-pregnant, young adult stage, no antibiotic use, unsafe sexual intercourse, sexually active)2025-10-22v31 / 13pendingNo
1263naOverall impact of Chlamydia infection across both body sites ( high in control compared to chlamydia in homo sapiens female hospital vagina caucasian italy anus bologna non-pregnant young adult stage no antibiotic use unsafe sexual intercourse sexually active )2025-10-22v31 / 15pendingNo
1263naCT-positive Vaginal Microbiome (dominant homo sapiens, female, hospital, vagina, caucasian, italy, chlamydia, bologna, non-pregnant, young adult stage, no antibiotic use, unsafe sexual intercourse, sexually active)2025-10-22v31 / 17pendingNo
1263naComparison of vaginal vs. anal microbiome in Chlamydia-positive individuals ( high in anus compared to vagina in homo sapiens female hospital caucasian italy chlamydia bologna non-pregnant young adult stage no antibiotic use unsafe sexual intercourse sexually active )2025-10-22v31 / 19pendingNo
1263naCT-positive Anal Microbiome (dominant homo sapiens, female, hospital, caucasian, italy, anus, chlamydia, bologna, non-pregnant, young adult stage, no antibiotic use, unsafe sexual intercourse, sexually active)2025-10-22v31 / 23pendingNo
1263naCT-negative Anal Microbiome (dominant homo sapiens, control, female, hospital, caucasian, italy, anus, bologna, non-pregnant, young adult stage, no antibiotic use, unsafe sexual intercourse, sexually active)2025-10-22v31 / 25pendingNo
1263naComparison of vaginal vs. anal microbiome in Chlamydia-positive individuals ( high in vagina compared to anus in homo sapiens female hospital caucasian italy chlamydia bologna non-pregnant young adult stage no antibiotic use unsafe sexual intercourse sexually active )2025-10-22v31 / 31pendingNo
1263naCT-negative Vaginal Microbiome (common homo sapiens, control, female, hospital, vagina, caucasian, italy, bologna, non-pregnant, young adult stage, no antibiotic use, unsafe sexual intercourse, sexually active)2025-10-22v31 / 33pendingNo
1263naCT-positive Vaginal Microbiome (common homo sapiens, female, hospital, vagina, caucasian, italy, chlamydia, bologna, non-pregnant, young adult stage, no antibiotic use, unsafe sexual intercourse, sexually active)2025-10-22v31 / 43pendingNo
1263naCT-negative Anal Microbiome (common homo sapiens, control, female, hospital, caucasian, italy, anus, bologna, non-pregnant, young adult stage, no antibiotic use, unsafe sexual intercourse, sexually active)2025-10-22v31 / 78pendingNo
1263naCT-positive Anal Microbiome (common homo sapiens, female, hospital, caucasian, italy, anus, chlamydia, bologna, non-pregnant, young adult stage, no antibiotic use, unsafe sexual intercourse, sexually active)2025-10-22v31 / 105pendingNo
1263naComparison of vaginal vs. anal microbiome in Chlamydia-negative individuals ( high in vagina compared to anus in homo sapiens control female hospital caucasian italy bologna non-pregnant young adult stage no antibiotic use unsafe sexual intercourse sexually active )2025-10-22v31 / 138pendingNo
1263naComparison of vaginal vs. anal microbiome in Chlamydia-negative individuals ( high in anus compared to vagina in homo sapiens control female hospital caucasian italy bologna non-pregnant young adult stage no antibiotic use unsafe sexual intercourse sexually active )2025-10-22v31 / 141pendingNo
1263naOverall differences between vaginal and anal microbiomes (regardless of Chlamydia status) ( high in vagina compared to anus in homo sapiens control female hospital caucasian italy chlamydia bologna non-pregnant young adult stage no antibiotic use unsafe sexual intercourse sexually active )2025-10-22v31 / 225pendingNo
1263naOverall differences between vaginal and anal microbiomes (regardless of Chlamydia status) ( high in anus compared to vagina in homo sapiens control female hospital caucasian italy chlamydia bologna non-pregnant young adult stage no antibiotic use unsafe sexual intercourse sexually active )2025-10-22v31 / 231pendingNo

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