Experiment ID: 1262

Field Description
namevaginal and anal microbiome during chlamydia trachomatis infections (8539191) - chatgpt-4o-latest
proj_id8539191
sraprjna764037
date_of_upload22/10/2025 01:58
doi10.3390/pathogens10101347
modelchatgpt-4o-latest

Annotations for experiment:

term enrichment score
TermScore
young adult stage0.200000
LOWER IN vagina0.190476
LOWER IN rectum0.148148
rectum0.141176
vagina0.112000
female0.024691
control0.008804
LOWER IN control0.008584
homo sapiens0.005168
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN vagina0.250000
LOWER IN rectum0.142857
young adult stage0.111111
rectum0.083333
vagina0.062500
female0.012500
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
Fraction of annotations for the query sequences containing the term
TermScore
geographic location1.000000
hospital outpatient clinic1.000000
female1.000000
homo sapiens1.000000
22-year-old human stage1.000000
young adult stage1.000000
puente1.000000
vagina0.538462
chlamydia0.538462
control0.461538
anus0.461538
rectum0.461538
LOWER IN anus0.153846
LOWER IN rectum0.153846
LOWER IN vagina0.153846
LOWER IN control0.076923
Number of experiments associating the term to the sequence
TermScore
vagina1.000000
LOWER IN anus1.000000
LOWER IN rectum1.000000
geographic location1.000000
hospital outpatient clinic1.000000
control1.000000
female1.000000
homo sapiens1.000000
22-year-old human stage1.000000
young adult stage1.000000
puente1.000000
anus1.000000
rectum1.000000
LOWER IN vagina1.000000
chlamydia1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1262naVaginal microbiota in Chlamydia-positive vs Chlamydia-negative women ( high in chlamydia compared to control in vagina geographic location hospital outpatient clinic female homo sapiens 22-year-old human stage young adult stage puente )2025-10-22v31 / 4pendingNo
1262naVaginal vs anal microbiota in Chlamydia-positive women ( high in vagina compared to anus rectum in geographic location hospital outpatient clinic chlamydia female homo sapiens 22-year-old human stage young adult stage puente )2025-10-22v31 / 7pendingNo
1262naVaginal vs anal microbiota in Chlamydia-positive women ( high in anus rectum compared to vagina in geographic location hospital outpatient clinic chlamydia female homo sapiens 22-year-old human stage young adult stage puente )2025-10-22v31 / 12pendingNo
1262naVaginal swabs from Chlamydia-negative women (dominant vagina, geographic location, hospital outpatient clinic, control, female, homo sapiens, 22-year-old human stage, young adult stage, puente)2025-10-22v31 / 13pendingNo
1262naVaginal swabs from Chlamydia-positive women (dominant vagina, geographic location, hospital outpatient clinic, chlamydia, female, homo sapiens, 22-year-old human stage, young adult stage, puente)2025-10-22v31 / 17pendingNo
1262naAnal swabs from Chlamydia-positive women (dominant geographic location, hospital outpatient clinic, anus, chlamydia, female, homo sapiens, 22-year-old human stage, rectum, young adult stage, puente)2025-10-22v31 / 23pendingNo
1262naAnal swabs from Chlamydia-negative women (dominant geographic location, hospital outpatient clinic, anus, control, female, homo sapiens, 22-year-old human stage, rectum, young adult stage, puente)2025-10-22v31 / 25pendingNo
1262naVaginal swabs from Chlamydia-negative women (common vagina, geographic location, hospital outpatient clinic, control, female, homo sapiens, 22-year-old human stage, young adult stage, puente)2025-10-22v31 / 33pendingNo
1262naVaginal swabs from Chlamydia-positive women (common vagina, geographic location, hospital outpatient clinic, chlamydia, female, homo sapiens, 22-year-old human stage, young adult stage, puente)2025-10-22v31 / 43pendingNo
1262naAnal swabs from Chlamydia-negative women (common geographic location, hospital outpatient clinic, anus, control, female, homo sapiens, 22-year-old human stage, rectum, young adult stage, puente)2025-10-22v31 / 78pendingNo
1262naAnal swabs from Chlamydia-positive women (common geographic location, hospital outpatient clinic, anus, chlamydia, female, homo sapiens, 22-year-old human stage, rectum, young adult stage, puente)2025-10-22v31 / 105pendingNo
1262naVaginal vs anal microbiota in Chlamydia-negative women ( high in anus rectum compared to vagina in geographic location hospital outpatient clinic control female homo sapiens 22-year-old human stage young adult stage puente )2025-10-22v31 / 137pendingNo
1262naVaginal vs anal microbiota in Chlamydia-negative women ( high in vagina compared to anus rectum in geographic location hospital outpatient clinic control female homo sapiens 22-year-old human stage young adult stage puente )2025-10-22v31 / 145pendingNo

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