Experiment ID: 1261

Field Description
namevaginal and anal microbiome during chlamydia trachomatis infections (8539191) - gemini-2.0-flash
proj_id8539191
sraprjna764037
date_of_upload22/10/2025 01:48
doi10.3390/pathogens10101347
modelgemini-2.0-flash

Annotations for experiment:

term enrichment score
TermScore
bologna0.250000
LOWER IN vagina0.153846
young adult stage0.111111
LOWER IN rectum0.105263
rectum0.080000
vagina0.060606
italy0.031250
control0.004435
homo sapiens0.002591
Fraction of dbbact annotations with this term covered by the query
TermScore
bologna0.142857
LOWER IN vagina0.142857
LOWER IN rectum0.076923
young adult stage0.058824
rectum0.043478
vagina0.032258
italy0.015873
control0.002227
homo sapiens0.001297
Fraction of annotations for the query sequences containing the term
TermScore
young adult stage1.000000
italy1.000000
bologna1.000000
homo sapiens1.000000
commune of bologna1.000000
province of modena1.000000
vagina0.500000
control0.500000
anus0.500000
rectum0.500000
chlamydia0.500000
LOWER IN anus0.166667
LOWER IN rectum0.166667
LOWER IN vagina0.166667
Number of experiments associating the term to the sequence
TermScore
vagina1.000000
LOWER IN anus1.000000
LOWER IN rectum1.000000
young adult stage1.000000
italy1.000000
control1.000000
bologna1.000000
homo sapiens1.000000
commune of bologna1.000000
province of modena1.000000
anus1.000000
rectum1.000000
LOWER IN vagina1.000000
chlamydia1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1261naVaginal vs anal swabs (Chlamydia trachomatis positive) ( high in vagina compared to anus rectum in young adult stage italy bologna homo sapiens commune of bologna chlamydia province of modena )2025-10-22v31 / 8pendingNo
1261naVaginal swabs from Chlamydia trachomatis negative subjects (dominant young adult stage, italy, vagina, control, bologna, homo sapiens, commune of bologna, province of modena)2025-10-22v31 / 13pendingNo
1261naVaginal vs anal swabs (Chlamydia trachomatis positive) ( high in anus rectum compared to vagina in young adult stage italy bologna homo sapiens commune of bologna chlamydia province of modena )2025-10-22v31 / 16pendingNo
1261naVaginal swabs from Chlamydia trachomatis positive subjects (dominant young adult stage, italy, vagina, bologna, homo sapiens, commune of bologna, chlamydia, province of modena)2025-10-22v31 / 17pendingNo
1261naAnal swabs from Chlamydia trachomatis positive subjects (dominant young adult stage, anus, rectum, italy, bologna, homo sapiens, commune of bologna, chlamydia, province of modena)2025-10-22v31 / 23pendingNo
1261naAnal swabs from Chlamydia trachomatis negative subjects (dominant young adult stage, anus, rectum, italy, control, bologna, homo sapiens, commune of bologna, province of modena)2025-10-22v31 / 25pendingNo
1261naVaginal swabs from Chlamydia trachomatis negative subjects (common young adult stage, italy, vagina, control, bologna, homo sapiens, commune of bologna, province of modena)2025-10-22v31 / 33pendingNo
1261naVaginal swabs from Chlamydia trachomatis positive subjects (common young adult stage, italy, vagina, bologna, homo sapiens, commune of bologna, chlamydia, province of modena)2025-10-22v31 / 43pendingNo
1261naAnal swabs from Chlamydia trachomatis negative subjects (common young adult stage, anus, rectum, italy, control, bologna, homo sapiens, commune of bologna, province of modena)2025-10-22v31 / 78pendingNo
1261naAnal swabs from Chlamydia trachomatis positive subjects (common young adult stage, anus, rectum, italy, bologna, homo sapiens, commune of bologna, chlamydia, province of modena)2025-10-22v31 / 105pendingNo
1261naVaginal vs anal swabs (Chlamydia trachomatis negative) ( high in anus rectum compared to vagina in young adult stage italy control bologna homo sapiens commune of bologna province of modena )2025-10-22v31 / 135pendingNo
1261naVaginal vs anal swabs (Chlamydia trachomatis negative) ( high in vagina compared to anus rectum in young adult stage italy control bologna homo sapiens commune of bologna province of modena )2025-10-22v31 / 138pendingNo

Problems / suggestions? Please visit the dbBact forum