Experiment ID: 1260

Field Description
namevaginal and anal microbiome during chlamydia trachomatis infections (8539191) - gpt-5-chat-latest
proj_id8539191
sraprjna764037
date_of_upload22/10/2025 01:48
doi10.3390/pathogens10101347
modelgpt-5-chat-latest

Annotations for experiment:

term enrichment score
TermScore
chlamydia trachomatis0.500000
young adult stage0.200000
LOWER IN vagina0.181818
LOWER IN rectum0.142857
rectum0.142857
LOWER IN chlamydia trachomatis0.133333
vagina0.112676
female0.024691
china0.009390
control0.008811
LOWER IN control0.008547
homo sapiens0.005168
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN chlamydia trachomatis1.000000
chlamydia trachomatis0.500000
LOWER IN vagina0.250000
LOWER IN rectum0.142857
young adult stage0.111111
rectum0.083333
vagina0.062500
female0.012500
china0.004717
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
female1.000000
populated place, mozambique1.000000
china1.000000
young adult stage1.000000
22-year-old human stage1.000000
vagina0.571429
control0.500000
rectum0.500000
anus0.500000
chlamydia trachomatis0.500000
chlamydia0.500000
LOWER IN rectum0.142857
LOWER IN anus0.142857
LOWER IN vagina0.142857
LOWER IN chlamydia trachomatis0.071429
LOWER IN chlamydia0.071429
LOWER IN control0.071429
Number of experiments associating the term to the sequence
TermScore
vagina1.000000
LOWER IN rectum1.000000
LOWER IN anus1.000000
homo sapiens1.000000
control1.000000
female1.000000
populated place, mozambique1.000000
china1.000000
young adult stage1.000000
22-year-old human stage1.000000
rectum1.000000
anus1.000000
LOWER IN vagina1.000000
chlamydia trachomatis1.000000
chlamydia1.000000
LOWER IN chlamydia trachomatis1.000000
LOWER IN chlamydia1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1260naEffect of Chlamydia infection on vaginal microbiota ( high in chlamydia trachomatis chlamydia compared to control in homo sapiens female vagina populated place, mozambique china young adult stage 22-year-old human stage )2025-10-22v31 / 2pendingNo
1260naVaginal swabs from Chlamydia-negative women (dominant homo sapiens, control, female, vagina, populated place, mozambique, china, young adult stage, 22-year-old human stage)2025-10-22v31 / 13pendingNo
1260naVaginal swabs from Chlamydia-positive women (dominant homo sapiens, female, vagina, chlamydia trachomatis, chlamydia, populated place, mozambique, china, young adult stage, 22-year-old human stage)2025-10-22v31 / 17pendingNo
1260naOverall impact of Chlamydia infection across body sites ( high in control compared to chlamydia trachomatis chlamydia in homo sapiens female vagina rectum anus populated place, mozambique china young adult stage 22-year-old human stage )2025-10-22v31 / 19pendingNo
1260naAnal swabs from Chlamydia-positive women (dominant homo sapiens, female, rectum, anus, chlamydia trachomatis, chlamydia, populated place, mozambique, china, young adult stage, 22-year-old human stage)2025-10-22v31 / 23pendingNo
1260naAnal swabs from Chlamydia-negative women (dominant homo sapiens, control, female, rectum, anus, populated place, mozambique, china, young adult stage, 22-year-old human stage)2025-10-22v31 / 25pendingNo
1260naSite-specific microbiota differences in Chlamydia-positive women ( high in vagina compared to rectum anus in homo sapiens female chlamydia trachomatis chlamydia populated place, mozambique china young adult stage 22-year-old human stage )2025-10-22v31 / 26pendingNo
1260naSite-specific microbiota differences in Chlamydia-positive women ( high in rectum anus compared to vagina in homo sapiens female chlamydia trachomatis chlamydia populated place, mozambique china young adult stage 22-year-old human stage )2025-10-22v31 / 31pendingNo
1260naVaginal swabs from Chlamydia-negative women (common homo sapiens, control, female, vagina, populated place, mozambique, china, young adult stage, 22-year-old human stage)2025-10-22v31 / 33pendingNo
1260naVaginal swabs from Chlamydia-positive women (common homo sapiens, female, vagina, chlamydia trachomatis, chlamydia, populated place, mozambique, china, young adult stage, 22-year-old human stage)2025-10-22v31 / 43pendingNo
1260naAnal swabs from Chlamydia-negative women (common homo sapiens, control, female, rectum, anus, populated place, mozambique, china, young adult stage, 22-year-old human stage)2025-10-22v31 / 78pendingNo
1260naAnal swabs from Chlamydia-positive women (common homo sapiens, female, rectum, anus, chlamydia trachomatis, chlamydia, populated place, mozambique, china, young adult stage, 22-year-old human stage)2025-10-22v31 / 105pendingNo
1260naSite-specific microbiota differences in Chlamydia-negative women ( high in rectum anus compared to vagina in homo sapiens control female populated place, mozambique china young adult stage 22-year-old human stage )2025-10-22v31 / 142pendingNo
1260naSite-specific microbiota differences in Chlamydia-negative women ( high in vagina compared to rectum anus in homo sapiens control female populated place, mozambique china young adult stage 22-year-old human stage )2025-10-22v31 / 144pendingNo

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