Experiment ID: 1256

Field Description
nameimpaired gut microbiota-mediated short-chain fatty acid production precedes morbidity and mortality in people with hiv (nihms-1948184) - gpt-5-chat-latest
proj_idnihms-1948184
sraprjna994573
date_of_upload19/10/2025 16:52
doi10.1016/j.celrep.2023.113336
modelgpt-5-chat-latest

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN human immunodeficiency virus infectious disease0.500000
LOWER IN antiretroviral therapy0.500000
antiretroviral therapy0.500000
human immunodeficiency virus infectious disease0.333333
human middle aged stage0.250000
belgium0.111111
united kingdom0.062500
colon0.043478
intestine0.032258
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
homo sapiens1.000000
intestine1.000000
colon1.000000
belgium1.000000
human house1.000000
united kingdom1.000000
human middle aged stage1.000000
control0.500000
human immunodeficiency virus infectious disease0.500000
antiretroviral therapy0.500000
hiv-positive0.500000
LOWER IN human immunodeficiency virus infectious disease0.166667
LOWER IN antiretroviral therapy0.166667
LOWER IN hiv-positive0.166667
LOWER IN control0.166667
Number of experiments associating the term to the sequence
TermScore
control1.000000
LOWER IN human immunodeficiency virus infectious disease1.000000
LOWER IN antiretroviral therapy1.000000
LOWER IN hiv-positive1.000000
feces1.000000
homo sapiens1.000000
intestine1.000000
colon1.000000
belgium1.000000
human house1.000000
united kingdom1.000000
human middle aged stage1.000000
human immunodeficiency virus infectious disease1.000000
antiretroviral therapy1.000000
hiv-positive1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1256naHIV-positive fecal microbiome samples (dominant feces, homo sapiens, intestine, colon, belgium, human house, human immunodeficiency virus infectious disease, united kingdom, antiretroviral therapy, human middle aged stage, hiv-positive)2025-10-19v41 / 22pendingNo
1256naHIV-negative fecal microbiome samples (dominant feces, homo sapiens, control, intestine, colon, belgium, human house, united kingdom, human middle aged stage)2025-10-19v41 / 22pendingNo
1256naHIV-positive fecal microbiome samples (common feces, homo sapiens, intestine, colon, belgium, human house, human immunodeficiency virus infectious disease, united kingdom, antiretroviral therapy, human middle aged stage, hiv-positive)2025-10-19v41 / 95pendingNo
1256naHIV-negative fecal microbiome samples (common feces, homo sapiens, control, intestine, colon, belgium, human house, united kingdom, human middle aged stage)2025-10-19v41 / 149pendingNo
1256naHIV-positive vs HIV-negative fecal microbiome ( high in human immunodeficiency virus infectious disease antiretroviral therapy hiv-positive compared to control in feces homo sapiens intestine colon belgium human house united kingdom human middle aged stage )2025-10-19v41 / 225pendingNo
1256naHIV-positive vs HIV-negative fecal microbiome ( high in control compared to human immunodeficiency virus infectious disease antiretroviral therapy hiv-positive in feces homo sapiens intestine colon belgium human house united kingdom human middle aged stage )2025-10-19v41 / 227pendingNo

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