Experiment ID: 1255

Field Description
nameimpaired gut microbiota-mediated short-chain fatty acid production precedes morbidity and mortality in people with hiv (nihms-1948184) - gpt-5
proj_idnihms-1948184
sraprjna994573
date_of_upload19/10/2025 16:49
doi10.1016/j.celrep.2023.113336
modelgpt-5

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN human immunodeficiency virus infectious disease0.500000
LOWER IN antiretroviral therapy0.500000
antiretroviral therapy0.500000
human immunodeficiency virus infectious disease0.333333
human middle aged stage0.250000
human aged stage0.250000
colon0.043478
male0.020000
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Exp. ID User ID Description Date Region Sequences Status Flag
1255naOlder adult male PWH (age 60–70) stool samples (dominant feces, homo sapiens, colon, human house, human immunodeficiency virus infectious disease, male, antiretroviral therapy, human aged stage, 60-year-old human stage, 61-year-old human stage, 62-year-old human stage, 63-year-old human stage, 64-year-old human stage, 65-year-old human stage, 66-year-old human stage, 67-year-old human stage, 68-year-old human stage, 69-year-old human stage, 70-year-old human stage, amsterdam, netherlands)2025-10-19v41 / 20pendingNo
1255naNormal BMI PWH (BMI 22–26) stool samples (dominant feces, homo sapiens, colon, human house, human immunodeficiency virus infectious disease, antiretroviral therapy, human middle aged stage, human aged stage, normal body mass index, amsterdam, netherlands)2025-10-19v41 / 21pendingNo
1255naPWH (HIV-positive) stool samples (dominant feces, homo sapiens, colon, human house, human immunodeficiency virus infectious disease, antiretroviral therapy, human middle aged stage, human aged stage, amsterdam, netherlands)2025-10-19v41 / 22pendingNo
1255naHIV-negative stool samples (matched cohort subset location) (dominant feces, homo sapiens, control, colon, human house, human middle aged stage, human aged stage, amsterdam, netherlands)2025-10-19v41 / 22pendingNo
1255naOlder adult male HIV-negative (age 60–70) stool samples (dominant feces, homo sapiens, control, colon, human house, male, human aged stage, 60-year-old human stage, 61-year-old human stage, 62-year-old human stage, 63-year-old human stage, 64-year-old human stage, 65-year-old human stage, 66-year-old human stage, 67-year-old human stage, 68-year-old human stage, 69-year-old human stage, 70-year-old human stage, amsterdam, netherlands)2025-10-19v41 / 23pendingNo
1255naNormal BMI HIV-negative (BMI 22–26) stool samples (dominant feces, homo sapiens, control, colon, human house, human middle aged stage, human aged stage, normal body mass index, amsterdam, netherlands)2025-10-19v41 / 23pendingNo
1255naOlder adult males (60–70): PWH vs HIV-negative ( high in human immunodeficiency virus infectious disease antiretroviral therapy compared to control in feces homo sapiens colon human house male human aged stage 60-year-old human stage 61-year-old human stage 62-year-old human stage 63-year-old human stage 64-year-old human stage 65-year-old human stage 66-year-old human stage 67-year-old human stage 68-year-old human stage 69-year-old human stage 70-year-old human stage amsterdam, netherlands )2025-10-19v41 / 62pendingNo
1255naOlder adult males (60–70): PWH vs HIV-negative ( high in control compared to human immunodeficiency virus infectious disease antiretroviral therapy in feces homo sapiens colon human house male human aged stage 60-year-old human stage 61-year-old human stage 62-year-old human stage 63-year-old human stage 64-year-old human stage 65-year-old human stage 66-year-old human stage 67-year-old human stage 68-year-old human stage 69-year-old human stage 70-year-old human stage amsterdam, netherlands )2025-10-19v41 / 64pendingNo
1255naNormal BMI (22–26): PWH vs HIV-negative ( high in human immunodeficiency virus infectious disease antiretroviral therapy compared to control in feces homo sapiens colon human house human middle aged stage human aged stage normal body mass index amsterdam, netherlands )2025-10-19v41 / 90pendingNo
1255naNormal BMI (22–26): PWH vs HIV-negative ( high in control compared to human immunodeficiency virus infectious disease antiretroviral therapy in feces homo sapiens colon human house human middle aged stage human aged stage normal body mass index amsterdam, netherlands )2025-10-19v41 / 91pendingNo
1255naNormal BMI PWH (BMI 22–26) stool samples (common feces, homo sapiens, colon, human house, human immunodeficiency virus infectious disease, antiretroviral therapy, human middle aged stage, human aged stage, normal body mass index, amsterdam, netherlands)2025-10-19v41 / 94pendingNo
1255naPWH (HIV-positive) stool samples (common feces, homo sapiens, colon, human house, human immunodeficiency virus infectious disease, antiretroviral therapy, human middle aged stage, human aged stage, amsterdam, netherlands)2025-10-19v41 / 95pendingNo
1255naOlder adult male PWH (age 60–70) stool samples (common feces, homo sapiens, colon, human house, human immunodeficiency virus infectious disease, male, antiretroviral therapy, human aged stage, 60-year-old human stage, 61-year-old human stage, 62-year-old human stage, 63-year-old human stage, 64-year-old human stage, 65-year-old human stage, 66-year-old human stage, 67-year-old human stage, 68-year-old human stage, 69-year-old human stage, 70-year-old human stage, amsterdam, netherlands)2025-10-19v41 / 103pendingNo
1255naOlder adult male HIV-negative (age 60–70) stool samples (common feces, homo sapiens, control, colon, human house, male, human aged stage, 60-year-old human stage, 61-year-old human stage, 62-year-old human stage, 63-year-old human stage, 64-year-old human stage, 65-year-old human stage, 66-year-old human stage, 67-year-old human stage, 68-year-old human stage, 69-year-old human stage, 70-year-old human stage, amsterdam, netherlands)2025-10-19v41 / 148pendingNo
1255naHIV-negative stool samples (matched cohort subset location) (common feces, homo sapiens, control, colon, human house, human middle aged stage, human aged stage, amsterdam, netherlands)2025-10-19v41 / 149pendingNo
1255naNormal BMI HIV-negative (BMI 22–26) stool samples (common feces, homo sapiens, control, colon, human house, human middle aged stage, human aged stage, normal body mass index, amsterdam, netherlands)2025-10-19v41 / 150pendingNo
1255naPWH vs HIV-negative (Amsterdam, stool; overall cohort) ( high in human immunodeficiency virus infectious disease antiretroviral therapy compared to control in feces homo sapiens colon human house human middle aged stage human aged stage amsterdam, netherlands )2025-10-19v41 / 216pendingNo
1255naPWH vs HIV-negative (Amsterdam, stool; overall cohort) ( high in control compared to human immunodeficiency virus infectious disease antiretroviral therapy in feces homo sapiens colon human house human middle aged stage human aged stage amsterdam, netherlands )2025-10-19v41 / 217pendingNo

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