Experiment ID: 1255

Field Description
nameimpaired gut microbiota-mediated short-chain fatty acid production precedes morbidity and mortality in people with hiv (nihms-1948184) - gpt-5
proj_idnihms-1948184
sraprjna994573
date_of_upload19/10/2025 16:49
doi10.1016/j.celrep.2023.113336
modelgpt-5

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN antiretroviral therapy0.500000
LOWER IN human immunodeficiency virus infectious disease0.500000
antiretroviral therapy0.500000
human immunodeficiency virus infectious disease0.333333
human aged stage0.250000
human middle aged stage0.250000
colon0.043478
male0.020000
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Exp. ID User ID Description Date Region Sequences Status Flag
1255naOlder adult male PWH (age 60–70) stool samples (dominant 62-year-old human stage, amsterdam, netherlands, 68-year-old human stage, 70-year-old human stage, 63-year-old human stage, human aged stage, homo sapiens, human immunodeficiency virus infectious disease, male, 67-year-old human stage, human house, 60-year-old human stage, colon, 64-year-old human stage, 69-year-old human stage, 66-year-old human stage, 65-year-old human stage, antiretroviral therapy, feces, 61-year-old human stage)2025-10-19v41 / 20pendingNo
1255naNormal BMI PWH (BMI 22–26) stool samples (dominant human aged stage, human house, homo sapiens, human immunodeficiency virus infectious disease, normal body mass index, colon, human middle aged stage, amsterdam, netherlands, antiretroviral therapy, feces)2025-10-19v41 / 21pendingNo
1255naPWH (HIV-positive) stool samples (dominant human aged stage, human house, homo sapiens, human immunodeficiency virus infectious disease, human middle aged stage, colon, amsterdam, netherlands, antiretroviral therapy, feces)2025-10-19v41 / 22pendingNo
1255naHIV-negative stool samples (matched cohort subset location) (dominant human aged stage, human house, homo sapiens, human middle aged stage, colon, amsterdam, netherlands, control, feces)2025-10-19v41 / 22pendingNo
1255naOlder adult male HIV-negative (age 60–70) stool samples (dominant 62-year-old human stage, amsterdam, netherlands, 68-year-old human stage, 70-year-old human stage, 63-year-old human stage, human aged stage, homo sapiens, control, male, 67-year-old human stage, human house, 60-year-old human stage, colon, 64-year-old human stage, 69-year-old human stage, 66-year-old human stage, 65-year-old human stage, feces, 61-year-old human stage)2025-10-19v41 / 23pendingNo
1255naNormal BMI HIV-negative (BMI 22–26) stool samples (dominant human aged stage, human house, homo sapiens, human middle aged stage, colon, normal body mass index, amsterdam, netherlands, control, feces)2025-10-19v41 / 23pendingNo
1255naOlder adult males (60–70): PWH vs HIV-negative ( high in antiretroviral therapy human immunodeficiency virus infectious disease compared to control in human aged stage 62-year-old human stage human house 60-year-old human stage 65-year-old human stage homo sapiens colon 64-year-old human stage amsterdam, netherlands 68-year-old human stage male feces 61-year-old human stage 70-year-old human stage 69-year-old human stage 66-year-old human stage 63-year-old human stage 67-year-old human stage )2025-10-19v41 / 62pendingNo
1255naOlder adult males (60–70): PWH vs HIV-negative ( high in control compared to antiretroviral therapy human immunodeficiency virus infectious disease in human aged stage 62-year-old human stage human house 60-year-old human stage 65-year-old human stage homo sapiens colon 64-year-old human stage amsterdam, netherlands 68-year-old human stage male feces 61-year-old human stage 70-year-old human stage 69-year-old human stage 66-year-old human stage 63-year-old human stage 67-year-old human stage )2025-10-19v41 / 64pendingNo
1255naNormal BMI (22–26): PWH vs HIV-negative ( high in antiretroviral therapy human immunodeficiency virus infectious disease compared to control in human aged stage human house homo sapiens human middle aged stage colon normal body mass index amsterdam, netherlands feces )2025-10-19v41 / 90pendingNo
1255naNormal BMI (22–26): PWH vs HIV-negative ( high in control compared to antiretroviral therapy human immunodeficiency virus infectious disease in human aged stage human house homo sapiens human middle aged stage colon normal body mass index amsterdam, netherlands feces )2025-10-19v41 / 91pendingNo
1255naNormal BMI PWH (BMI 22–26) stool samples (common human aged stage, human house, homo sapiens, human immunodeficiency virus infectious disease, normal body mass index, colon, human middle aged stage, amsterdam, netherlands, antiretroviral therapy, feces)2025-10-19v41 / 94pendingNo
1255naPWH (HIV-positive) stool samples (common human aged stage, human house, homo sapiens, human immunodeficiency virus infectious disease, human middle aged stage, colon, amsterdam, netherlands, antiretroviral therapy, feces)2025-10-19v41 / 95pendingNo
1255naOlder adult male PWH (age 60–70) stool samples (common 62-year-old human stage, amsterdam, netherlands, 68-year-old human stage, 70-year-old human stage, 63-year-old human stage, human aged stage, homo sapiens, human immunodeficiency virus infectious disease, male, 67-year-old human stage, human house, 60-year-old human stage, colon, 64-year-old human stage, 69-year-old human stage, 66-year-old human stage, 65-year-old human stage, antiretroviral therapy, feces, 61-year-old human stage)2025-10-19v41 / 103pendingNo
1255naOlder adult male HIV-negative (age 60–70) stool samples (common 62-year-old human stage, amsterdam, netherlands, 68-year-old human stage, 70-year-old human stage, 63-year-old human stage, human aged stage, homo sapiens, control, male, 67-year-old human stage, human house, 60-year-old human stage, colon, 64-year-old human stage, 69-year-old human stage, 66-year-old human stage, 65-year-old human stage, feces, 61-year-old human stage)2025-10-19v41 / 148pendingNo
1255naHIV-negative stool samples (matched cohort subset location) (common human aged stage, human house, homo sapiens, human middle aged stage, colon, amsterdam, netherlands, control, feces)2025-10-19v41 / 149pendingNo
1255naNormal BMI HIV-negative (BMI 22–26) stool samples (common human aged stage, human house, homo sapiens, human middle aged stage, colon, normal body mass index, amsterdam, netherlands, control, feces)2025-10-19v41 / 150pendingNo
1255naPWH vs HIV-negative (Amsterdam, stool; overall cohort) ( high in antiretroviral therapy human immunodeficiency virus infectious disease compared to control in human aged stage human house homo sapiens human middle aged stage colon amsterdam, netherlands feces )2025-10-19v41 / 216pendingNo
1255naPWH vs HIV-negative (Amsterdam, stool; overall cohort) ( high in control compared to antiretroviral therapy human immunodeficiency virus infectious disease in human aged stage human house homo sapiens human middle aged stage colon amsterdam, netherlands feces )2025-10-19v41 / 217pendingNo

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