Experiment ID: 1252

Field Description
namegut-microbiota-based ensemble model predicts prognosis of pediatric inflammatory bowel disease (11650326) - gpt-5
proj_id11650326
sraprjna917086
date_of_upload19/10/2025 15:32
doi10.1016/j.isci.2024.111442
modelgpt-5

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN active disease0.500000
active disease0.500000
LOWER IN left colon0.250000
left colon0.250000
LOWER IN irritable bowel syndrome0.166667
irritable bowel syndrome0.166667
inflammatory bowel disease0.111111
adolescent stage0.076923
LOWER IN ileum0.066667
LOWER IN colon0.055556
south korea0.052632
ileum0.052632
LOWER IN crohn's disease0.050000
LOWER IN ulcerative colitis0.047619
ulcerative colitis0.045455
colon0.043478
crohn's disease0.043478
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
adolescent stage1.000000
feces1.000000
homo sapiens1.000000
human gut1.000000
south korea1.000000
crohn's disease0.392857
control0.357143
ulcerative colitis0.357143
active disease0.357143
ileum0.321429
colon0.321429
clinical remission0.321429
left colon0.285714
LOWER IN clinical remission0.250000
LOWER IN active disease0.214286
LOWER IN control0.178571
irritable bowel syndrome0.178571
LOWER IN ileum0.142857
LOWER IN colon0.142857
LOWER IN ulcerative colitis0.142857
LOWER IN left colon0.142857
LOWER IN crohn's disease0.142857
LOWER IN irritable bowel syndrome0.071429
very high fecal calprotectin0.071429
calprotectin0.071429
inflammatory bowel disease0.071429
anti-tnf therapy0.071429
tumor necrosis factor alpha inhibitor0.071429
Exp. ID User ID Description Date Region Sequences Status Flag
1252naActive IBD (CD-active + UC-active) vs Remission IBD (CD-remission + UC-remission) ( high in active disease compared to clinical remission in ileum colon ulcerative colitis feces left colon adolescent stage homo sapiens human gut crohn's disease south korea )2025-10-19v31 / 2pendingNo
1252naUlcerative colitis (all states) vs FGID controls ( high in control irritable bowel syndrome compared to clinical remission ulcerative colitis left colon active disease in adolescent stage feces homo sapiens human gut south korea )2025-10-19v31 / 10pendingNo
1252naUlcerative colitis - active state (dominant ulcerative colitis, feces, left colon, adolescent stage, homo sapiens, human gut, active disease, south korea)2025-10-19v31 / 16pendingNo
1252naFunctional gastrointestinal disorder (FGID) controls (dominant irritable bowel syndrome, adolescent stage, feces, control, homo sapiens, human gut, south korea)2025-10-19v31 / 18pendingNo
1252naUlcerative colitis (all states) vs Healthy controls ( high in control compared to clinical remission ulcerative colitis left colon active disease in adolescent stage feces homo sapiens human gut south korea )2025-10-19v31 / 18pendingNo
1252naAnti-TNF users (any disease category) (dominant ulcerative colitis, inflammatory bowel disease, feces, adolescent stage, homo sapiens, human gut, anti-tnf therapy, crohn's disease, south korea, tumor necrosis factor alpha inhibitor)2025-10-19v31 / 19pendingNo
1252naUlcerative colitis (all states) vs Healthy controls ( high in clinical remission ulcerative colitis left colon active disease compared to control in adolescent stage feces homo sapiens human gut south korea )2025-10-19v31 / 19pendingNo
1252naHealthy controls (Korean pediatric stool) (dominant adolescent stage, feces, control, homo sapiens, human gut, south korea)2025-10-19v31 / 20pendingNo
1252naUlcerative colitis - remission state (dominant ulcerative colitis, feces, left colon, adolescent stage, clinical remission, homo sapiens, human gut, south korea)2025-10-19v31 / 21pendingNo
1252naCrohn’s disease - remission state (dominant ileum, colon, feces, adolescent stage, clinical remission, homo sapiens, human gut, crohn's disease, south korea)2025-10-19v31 / 24pendingNo
1252naVery high fecal calprotectin (>2000 mg/kg) stool samples (dominant adolescent stage, feces, homo sapiens, human gut, very high fecal calprotectin, south korea, calprotectin)2025-10-19v31 / 26pendingNo
1252naCrohn’s disease - active state (common ileum, colon, feces, adolescent stage, homo sapiens, active disease, human gut, crohn's disease, south korea)2025-10-19v31 / 28pendingNo
1252naCrohn’s disease - active state (dominant ileum, colon, feces, adolescent stage, homo sapiens, active disease, human gut, crohn's disease, south korea)2025-10-19v31 / 28pendingNo
1252naCrohn’s disease - remission state (common ileum, colon, feces, adolescent stage, clinical remission, homo sapiens, human gut, crohn's disease, south korea)2025-10-19v31 / 32pendingNo
1252naUlcerative colitis - active state (common ulcerative colitis, feces, left colon, adolescent stage, homo sapiens, human gut, active disease, south korea)2025-10-19v31 / 33pendingNo
1252naAnti-TNF users (any disease category) (common ulcerative colitis, inflammatory bowel disease, feces, adolescent stage, homo sapiens, human gut, anti-tnf therapy, crohn's disease, south korea, tumor necrosis factor alpha inhibitor)2025-10-19v31 / 36pendingNo
1252naVery high fecal calprotectin (>2000 mg/kg) stool samples (common adolescent stage, feces, homo sapiens, human gut, very high fecal calprotectin, south korea, calprotectin)2025-10-19v31 / 43pendingNo
1252naUlcerative colitis - remission state (common ulcerative colitis, feces, left colon, adolescent stage, clinical remission, homo sapiens, human gut, south korea)2025-10-19v31 / 47pendingNo
1252naFunctional gastrointestinal disorder (FGID) controls (common irritable bowel syndrome, adolescent stage, feces, control, homo sapiens, human gut, south korea)2025-10-19v31 / 51pendingNo
1252naIBD (CD + UC) vs FGID controls ( high in control irritable bowel syndrome compared to ileum colon ulcerative colitis left colon clinical remission active disease crohn's disease in adolescent stage feces homo sapiens human gut south korea )2025-10-19v31 / 57pendingNo
1252naHealthy controls (Korean pediatric stool) (common adolescent stage, feces, control, homo sapiens, human gut, south korea)2025-10-19v31 / 61pendingNo
1252naIBD (CD + UC) vs FGID controls ( high in ileum colon ulcerative colitis left colon clinical remission active disease crohn's disease compared to control irritable bowel syndrome in adolescent stage feces homo sapiens human gut south korea )2025-10-19v31 / 61pendingNo
1252naEach IBD subtype vs FGID controls ( high in control irritable bowel syndrome compared to ileum colon clinical remission active disease crohn's disease in adolescent stage feces homo sapiens human gut south korea )2025-10-19v31 / 63pendingNo
1252naEach IBD subtype vs FGID controls ( high in ileum colon clinical remission active disease crohn's disease compared to control irritable bowel syndrome in adolescent stage feces homo sapiens human gut south korea )2025-10-19v31 / 65pendingNo
1252naEach IBD subtype vs Healthy controls ( high in ileum colon clinical remission active disease crohn's disease compared to control in adolescent stage feces homo sapiens human gut south korea )2025-10-19v31 / 109pendingNo
1252naIBD (CD + UC) vs Healthy controls (Korean pediatric stool) ( high in ileum colon ulcerative colitis left colon clinical remission active disease crohn's disease compared to control in adolescent stage feces homo sapiens human gut south korea )2025-10-19v31 / 113pendingNo
1252naEach IBD subtype vs Healthy controls ( high in control compared to ileum colon clinical remission active disease crohn's disease in adolescent stage feces homo sapiens human gut south korea )2025-10-19v31 / 114pendingNo
1252naIBD (CD + UC) vs Healthy controls (Korean pediatric stool) ( high in control compared to ileum colon ulcerative colitis left colon clinical remission active disease crohn's disease in adolescent stage feces homo sapiens human gut south korea )2025-10-19v31 / 116pendingNo

Problems / suggestions? Please visit the dbBact forum