Experiment ID: 1241

Field Description
namegut-microbiota-based ensemble model predicts prognosis of pediatric inflammatory bowel disease (11650326) - gpt-5
proj_id11650326
sraprjna917086
date_of_upload15/10/2025 21:33
doi10.1016/j.isci.2024.111442
modelgpt-5

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN active disease0.500000
active disease0.500000
LOWER IN left colon0.250000
left colon0.250000
irritable bowel syndrome0.166667
LOWER IN irritable bowel syndrome0.166667
LOWER IN inflammatory bowel disease0.111111
inflammatory bowel disease0.111111
adolescent stage0.076923
LOWER IN ileum0.066667
LOWER IN colon0.055556
south korea0.052632
ileum0.052632
LOWER IN crohn's disease0.050000
LOWER IN ulcerative colitis0.047619
ulcerative colitis0.045455
colon0.043478
crohn's disease0.043478
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
homo sapiens1.000000
south korea1.000000
metropolitan city (republic of korea)1.000000
adolescent stage1.000000
human gut1.000000
colon0.760000
inflammatory bowel disease0.760000
ileum0.520000
crohn's disease0.520000
ulcerative colitis0.480000
active disease0.480000
control0.400000
irritable bowel syndrome0.320000
left colon0.320000
clinical remission0.200000
LOWER IN colon0.080000
LOWER IN ileum0.080000
LOWER IN left colon0.080000
LOWER IN inflammatory bowel disease0.080000
LOWER IN crohn's disease0.080000
LOWER IN ulcerative colitis0.080000
LOWER IN control0.080000
LOWER IN irritable bowel syndrome0.080000
LOWER IN clinical remission0.080000
LOWER IN active disease0.040000
Exp. ID User ID Description Date Region Sequences Status Flag
1241naActive Crohn's disease vs Remission Crohn's disease (pediatric stool, Korea) ( high in active disease compared to clinical remission in feces homo sapiens colon ileum inflammatory bowel disease crohn's disease south korea metropolitan city (republic of korea) adolescent stage human gut )2025-10-15v31 / 1pendingNo
1241naUlcerative colitis - Active (stool, pediatric, Korea) (dominant feces, homo sapiens, colon, left colon, inflammatory bowel disease, ulcerative colitis, south korea, metropolitan city (republic of korea), active disease, adolescent stage, human gut)2025-10-15v31 / 16pendingNo
1241naFunctional GI disorder controls (stool, pediatric, Korea) (dominant feces, homo sapiens, control, irritable bowel syndrome, south korea, metropolitan city (republic of korea), adolescent stage, human gut)2025-10-15v31 / 18pendingNo
1241naActive IBD (CD_active + UC_active) vs Controls (HC + FGD) (dominant feces, homo sapiens, control, colon, ileum, inflammatory bowel disease, crohn's disease, ulcerative colitis, irritable bowel syndrome, south korea, metropolitan city (republic of korea), active disease, adolescent stage, human gut)2025-10-15v31 / 19pendingNo
1241naHealthy controls (stool, pediatric, Korea) (dominant feces, homo sapiens, control, south korea, metropolitan city (republic of korea), adolescent stage, human gut)2025-10-15v31 / 20pendingNo
1241naUC by activity (Active vs Remission) (dominant feces, homo sapiens, colon, left colon, inflammatory bowel disease, ulcerative colitis, south korea, metropolitan city (republic of korea), active disease, adolescent stage, human gut)2025-10-15v31 / 20pendingNo
1241naRemission IBD (CD_remission + UC_remission) vs Controls (HC + FGD) (dominant feces, homo sapiens, control, colon, ileum, inflammatory bowel disease, crohn's disease, ulcerative colitis, irritable bowel syndrome, south korea, metropolitan city (republic of korea), adolescent stage, human gut)2025-10-15v31 / 20pendingNo
1241naUlcerative colitis - Remission (stool, pediatric, Korea) (dominant feces, homo sapiens, colon, left colon, inflammatory bowel disease, ulcerative colitis, south korea, metropolitan city (republic of korea), adolescent stage, clinical remission, human gut)2025-10-15v31 / 21pendingNo
1241naCrohn's disease by activity (Active vs Remission) (dominant feces, homo sapiens, colon, ileum, inflammatory bowel disease, crohn's disease, south korea, metropolitan city (republic of korea), active disease, adolescent stage, human gut)2025-10-15v31 / 23pendingNo
1241naCrohn's disease - Remission (stool, pediatric, Korea) (dominant feces, homo sapiens, colon, ileum, inflammatory bowel disease, crohn's disease, south korea, metropolitan city (republic of korea), adolescent stage, clinical remission, human gut)2025-10-15v31 / 24pendingNo
1241naCrohn's disease - Active (stool, pediatric, Korea) (common feces, homo sapiens, colon, ileum, inflammatory bowel disease, crohn's disease, south korea, metropolitan city (republic of korea), active disease, adolescent stage, human gut)2025-10-15v31 / 28pendingNo
1241naCrohn's disease - Active (stool, pediatric, Korea) (dominant feces, homo sapiens, colon, ileum, inflammatory bowel disease, crohn's disease, south korea, metropolitan city (republic of korea), active disease, adolescent stage, human gut)2025-10-15v31 / 28pendingNo
1241naCrohn's disease by activity (Active vs Remission) (common feces, homo sapiens, colon, ileum, inflammatory bowel disease, crohn's disease, south korea, metropolitan city (republic of korea), active disease, adolescent stage, human gut)2025-10-15v31 / 30pendingNo
1241naCrohn's disease - Remission (stool, pediatric, Korea) (common feces, homo sapiens, colon, ileum, inflammatory bowel disease, crohn's disease, south korea, metropolitan city (republic of korea), adolescent stage, clinical remission, human gut)2025-10-15v31 / 32pendingNo
1241naUlcerative colitis - Active (stool, pediatric, Korea) (common feces, homo sapiens, colon, left colon, inflammatory bowel disease, ulcerative colitis, south korea, metropolitan city (republic of korea), active disease, adolescent stage, human gut)2025-10-15v31 / 33pendingNo
1241naRemission IBD (CD_remission + UC_remission) vs Controls (HC + FGD) ( high in control irritable bowel syndrome compared to colon ileum left colon inflammatory bowel disease crohn's disease ulcerative colitis clinical remission in feces homo sapiens south korea metropolitan city (republic of korea) adolescent stage human gut )2025-10-15v31 / 34pendingNo
1241naActive IBD (CD_active + UC_active) vs Controls (HC + FGD) (common feces, homo sapiens, control, colon, ileum, inflammatory bowel disease, crohn's disease, ulcerative colitis, irritable bowel syndrome, south korea, metropolitan city (republic of korea), active disease, adolescent stage, human gut)2025-10-15v31 / 38pendingNo
1241naRemission IBD (CD_remission + UC_remission) vs Controls (HC + FGD) ( high in colon ileum left colon inflammatory bowel disease crohn's disease ulcerative colitis clinical remission compared to control irritable bowel syndrome in feces homo sapiens south korea metropolitan city (republic of korea) adolescent stage human gut )2025-10-15v31 / 42pendingNo
1241naUC by activity (Active vs Remission) (common feces, homo sapiens, colon, left colon, inflammatory bowel disease, ulcerative colitis, south korea, metropolitan city (republic of korea), active disease, adolescent stage, human gut)2025-10-15v31 / 44pendingNo
1241naRemission IBD (CD_remission + UC_remission) vs Controls (HC + FGD) (common feces, homo sapiens, control, colon, ileum, inflammatory bowel disease, crohn's disease, ulcerative colitis, irritable bowel syndrome, south korea, metropolitan city (republic of korea), adolescent stage, human gut)2025-10-15v31 / 44pendingNo
1241naUlcerative colitis - Remission (stool, pediatric, Korea) (common feces, homo sapiens, colon, left colon, inflammatory bowel disease, ulcerative colitis, south korea, metropolitan city (republic of korea), adolescent stage, clinical remission, human gut)2025-10-15v31 / 47pendingNo
1241naFunctional GI disorder controls (stool, pediatric, Korea) (common feces, homo sapiens, control, irritable bowel syndrome, south korea, metropolitan city (republic of korea), adolescent stage, human gut)2025-10-15v31 / 51pendingNo
1241naHealthy controls (stool, pediatric, Korea) (common feces, homo sapiens, control, south korea, metropolitan city (republic of korea), adolescent stage, human gut)2025-10-15v31 / 61pendingNo
1241naActive IBD (CD_active + UC_active) vs Controls (HC + FGD) ( high in colon ileum left colon inflammatory bowel disease crohn's disease ulcerative colitis active disease compared to control irritable bowel syndrome in feces homo sapiens south korea metropolitan city (republic of korea) adolescent stage human gut )2025-10-15v31 / 95pendingNo
1241naActive IBD (CD_active + UC_active) vs Controls (HC + FGD) ( high in control irritable bowel syndrome compared to colon ileum left colon inflammatory bowel disease crohn's disease ulcerative colitis active disease in feces homo sapiens south korea metropolitan city (republic of korea) adolescent stage human gut )2025-10-15v31 / 96pendingNo

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