Experiment ID: 1241

Field Description
namegut-microbiota-based ensemble model predicts prognosis of pediatric inflammatory bowel disease (11650326) - gpt-5
proj_id11650326
sraprjna917086
date_of_upload15/10/2025 21:33
doi10.1016/j.isci.2024.111442
modelgpt-5

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN active disease0.500000
active disease0.500000
LOWER IN left colon0.250000
left colon0.250000
irritable bowel syndrome0.166667
LOWER IN irritable bowel syndrome0.166667
LOWER IN inflammatory bowel disease0.111111
inflammatory bowel disease0.111111
adolescent stage0.076923
LOWER IN ileum0.066667
LOWER IN colon0.055556
south korea0.052632
ileum0.052632
LOWER IN crohn's disease0.050000
LOWER IN ulcerative colitis0.047619
ulcerative colitis0.045455
crohn's disease0.043478
colon0.043478
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
metropolitan city (republic of korea)1.000000
human gut1.000000
feces1.000000
south korea1.000000
adolescent stage1.000000
homo sapiens1.000000
inflammatory bowel disease0.760000
colon0.760000
crohn's disease0.520000
ileum0.520000
active disease0.480000
ulcerative colitis0.480000
control0.400000
irritable bowel syndrome0.320000
left colon0.320000
clinical remission0.200000
LOWER IN crohn's disease0.080000
LOWER IN inflammatory bowel disease0.080000
LOWER IN colon0.080000
LOWER IN ileum0.080000
LOWER IN ulcerative colitis0.080000
LOWER IN left colon0.080000
LOWER IN control0.080000
LOWER IN irritable bowel syndrome0.080000
LOWER IN clinical remission0.080000
LOWER IN active disease0.040000
Exp. ID User ID Description Date Region Sequences Status Flag
1241naActive Crohn's disease vs Remission Crohn's disease (pediatric stool, Korea) ( high in active disease compared to clinical remission in crohn's disease inflammatory bowel disease colon metropolitan city (republic of korea) human gut feces ileum south korea adolescent stage homo sapiens )2025-10-15v31 / 1pendingNo
1241naUlcerative colitis - Active (stool, pediatric, Korea) (dominant active disease, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, feces, ulcerative colitis, adolescent stage, homo sapiens, south korea, left colon)2025-10-15v31 / 16pendingNo
1241naFunctional GI disorder controls (stool, pediatric, Korea) (dominant metropolitan city (republic of korea), human gut, control, irritable bowel syndrome, feces, south korea, adolescent stage, homo sapiens)2025-10-15v31 / 18pendingNo
1241naActive IBD (CD_active + UC_active) vs Controls (HC + FGD) (dominant active disease, crohn's disease, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, control, irritable bowel syndrome, feces, ileum, ulcerative colitis, adolescent stage, homo sapiens, south korea)2025-10-15v31 / 19pendingNo
1241naHealthy controls (stool, pediatric, Korea) (dominant metropolitan city (republic of korea), human gut, control, feces, south korea, adolescent stage, homo sapiens)2025-10-15v31 / 20pendingNo
1241naUC by activity (Active vs Remission) (dominant active disease, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, feces, ulcerative colitis, adolescent stage, homo sapiens, south korea, left colon)2025-10-15v31 / 20pendingNo
1241naRemission IBD (CD_remission + UC_remission) vs Controls (HC + FGD) (dominant crohn's disease, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, control, irritable bowel syndrome, feces, ileum, ulcerative colitis, adolescent stage, homo sapiens, south korea)2025-10-15v31 / 20pendingNo
1241naUlcerative colitis - Remission (stool, pediatric, Korea) (dominant clinical remission, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, feces, ulcerative colitis, adolescent stage, homo sapiens, south korea, left colon)2025-10-15v31 / 21pendingNo
1241naCrohn's disease by activity (Active vs Remission) (dominant active disease, crohn's disease, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, feces, ileum, south korea, adolescent stage, homo sapiens)2025-10-15v31 / 23pendingNo
1241naCrohn's disease - Remission (stool, pediatric, Korea) (dominant crohn's disease, clinical remission, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, feces, ileum, south korea, adolescent stage, homo sapiens)2025-10-15v31 / 24pendingNo
1241naCrohn's disease - Active (stool, pediatric, Korea) (common active disease, crohn's disease, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, feces, ileum, south korea, adolescent stage, homo sapiens)2025-10-15v31 / 28pendingNo
1241naCrohn's disease - Active (stool, pediatric, Korea) (dominant active disease, crohn's disease, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, feces, ileum, south korea, adolescent stage, homo sapiens)2025-10-15v31 / 28pendingNo
1241naCrohn's disease by activity (Active vs Remission) (common active disease, crohn's disease, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, feces, ileum, south korea, adolescent stage, homo sapiens)2025-10-15v31 / 30pendingNo
1241naCrohn's disease - Remission (stool, pediatric, Korea) (common crohn's disease, clinical remission, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, feces, ileum, south korea, adolescent stage, homo sapiens)2025-10-15v31 / 32pendingNo
1241naUlcerative colitis - Active (stool, pediatric, Korea) (common active disease, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, feces, ulcerative colitis, adolescent stage, homo sapiens, south korea, left colon)2025-10-15v31 / 33pendingNo
1241naRemission IBD (CD_remission + UC_remission) vs Controls (HC + FGD) ( high in control irritable bowel syndrome compared to crohn's disease clinical remission inflammatory bowel disease colon ileum ulcerative colitis left colon in metropolitan city (republic of korea) human gut feces south korea adolescent stage homo sapiens )2025-10-15v31 / 34pendingNo
1241naActive IBD (CD_active + UC_active) vs Controls (HC + FGD) (common active disease, crohn's disease, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, control, irritable bowel syndrome, feces, ileum, ulcerative colitis, adolescent stage, homo sapiens, south korea)2025-10-15v31 / 38pendingNo
1241naRemission IBD (CD_remission + UC_remission) vs Controls (HC + FGD) ( high in crohn's disease clinical remission inflammatory bowel disease colon ileum ulcerative colitis left colon compared to control irritable bowel syndrome in metropolitan city (republic of korea) human gut feces south korea adolescent stage homo sapiens )2025-10-15v31 / 42pendingNo
1241naUC by activity (Active vs Remission) (common active disease, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, feces, ulcerative colitis, adolescent stage, homo sapiens, south korea, left colon)2025-10-15v31 / 44pendingNo
1241naRemission IBD (CD_remission + UC_remission) vs Controls (HC + FGD) (common crohn's disease, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, control, irritable bowel syndrome, feces, ileum, ulcerative colitis, adolescent stage, homo sapiens, south korea)2025-10-15v31 / 44pendingNo
1241naUlcerative colitis - Remission (stool, pediatric, Korea) (common clinical remission, inflammatory bowel disease, colon, metropolitan city (republic of korea), human gut, feces, ulcerative colitis, adolescent stage, homo sapiens, south korea, left colon)2025-10-15v31 / 47pendingNo
1241naFunctional GI disorder controls (stool, pediatric, Korea) (common metropolitan city (republic of korea), human gut, control, irritable bowel syndrome, feces, south korea, adolescent stage, homo sapiens)2025-10-15v31 / 51pendingNo
1241naHealthy controls (stool, pediatric, Korea) (common metropolitan city (republic of korea), human gut, control, feces, south korea, adolescent stage, homo sapiens)2025-10-15v31 / 61pendingNo
1241naActive IBD (CD_active + UC_active) vs Controls (HC + FGD) ( high in active disease crohn's disease inflammatory bowel disease colon ileum ulcerative colitis left colon compared to control irritable bowel syndrome in metropolitan city (republic of korea) human gut feces south korea adolescent stage homo sapiens )2025-10-15v31 / 95pendingNo
1241naActive IBD (CD_active + UC_active) vs Controls (HC + FGD) ( high in control irritable bowel syndrome compared to active disease crohn's disease inflammatory bowel disease colon ileum ulcerative colitis left colon in metropolitan city (republic of korea) human gut feces south korea adolescent stage homo sapiens )2025-10-15v31 / 96pendingNo

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