Experiment ID: 1229

Field Description
namea modified mediterranean-style diet enhances brain function via specific gut-microbiome-brain mechanisms (10936641) - gpt-5-mini
proj_id10936641
sraprjna1011002
date_of_upload15/10/2025 21:04
doi10.1080/19490976.2024.2323752
modelgpt-5-mini

Annotations for experiment:

term enrichment score
TermScore
alzheimer's disease0.400000
mus musculus0.027027
female0.024691
LOWER IN control0.008830
control0.008762
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
alzheimer's disease0.250000
mus musculus0.013699
female0.012500
LOWER IN control0.004545
control0.004444
feces0.002294
Exp. ID User ID Description Date Region Sequences Status Flag
1229na4-week vs 8-week fecal microbiome (mid vs late intervention) ( high in mid-intervention compared to late-intervention in alzheimer's disease female transgenic app/ps1 mus musculus diet intervention (mkd vs wd) individual housing feces laboratory vivarium wild-type )2025-10-15v41 / 3pendingNo
1229na4-week fecal samples (all mice, mid-intervention) (dominant alzheimer's disease, female, transgenic app/ps1, mus musculus, diet intervention (mkd vs wd), individual housing, mid-intervention, feces, laboratory vivarium, wild-type)2025-10-15v41 / 13pendingNo
1229na8-week fecal samples (all mice, late-intervention) (dominant alzheimer's disease, female, transgenic app/ps1, mus musculus, diet intervention (mkd vs wd), individual housing, feces, laboratory vivarium, late-intervention, wild-type)2025-10-15v41 / 13pendingNo
1229naBaseline fecal samples (all mice, time 0) (dominant alzheimer's disease, female, control, transgenic app/ps1, mus musculus, individual housing, baseline, feces, laboratory vivarium, wild-type)2025-10-15v41 / 18pendingNo
1229naAll mouse gut microbiome samples (pooled across timepoints) (dominant alzheimer's disease, female, mediterranean-ketogenic diet (mkd), multi-omics (metagenomics, metabolomics), transgenic app/ps1, mus musculus, tallahassee, united states, individual housing, western-style diet (wd), feces, pooled across timepoints, laboratory vivarium, wild-type)2025-10-15v41 / 19pendingNo
1229na8-week fecal samples (all mice, late-intervention) (common alzheimer's disease, female, transgenic app/ps1, mus musculus, diet intervention (mkd vs wd), individual housing, feces, laboratory vivarium, late-intervention, wild-type)2025-10-15v41 / 83pendingNo
1229naAll mouse gut microbiome samples (pooled across timepoints) (common alzheimer's disease, female, mediterranean-ketogenic diet (mkd), multi-omics (metagenomics, metabolomics), transgenic app/ps1, mus musculus, tallahassee, united states, individual housing, western-style diet (wd), feces, pooled across timepoints, laboratory vivarium, wild-type)2025-10-15v41 / 88pendingNo
1229na4-week fecal samples (all mice, mid-intervention) (common alzheimer's disease, female, transgenic app/ps1, mus musculus, diet intervention (mkd vs wd), individual housing, mid-intervention, feces, laboratory vivarium, wild-type)2025-10-15v41 / 92pendingNo
1229naBaseline fecal samples (all mice, time 0) (common alzheimer's disease, female, control, transgenic app/ps1, mus musculus, individual housing, baseline, feces, laboratory vivarium, wild-type)2025-10-15v41 / 202pendingNo
1229naBaseline vs 4-week fecal microbiome (temporal change early) ( high in control baseline compared to diet intervention (mkd vs wd) mid-intervention in alzheimer's disease female transgenic app/ps1 mus musculus individual housing feces laboratory vivarium wild-type )2025-10-15v41 / 439pendingNo
1229naBaseline vs 4-week fecal microbiome (temporal change early) ( high in diet intervention (mkd vs wd) mid-intervention compared to control baseline in alzheimer's disease female transgenic app/ps1 mus musculus individual housing feces laboratory vivarium wild-type )2025-10-15v41 / 439pendingNo
1229naBaseline vs 8-week fecal microbiome (temporal change late) ( high in control baseline compared to diet intervention (mkd vs wd) late-intervention in alzheimer's disease female transgenic app/ps1 mus musculus individual housing feces laboratory vivarium wild-type )2025-10-15v41 / 445pendingNo
1229naBaseline vs 8-week fecal microbiome (temporal change late) ( high in diet intervention (mkd vs wd) late-intervention compared to control baseline in alzheimer's disease female transgenic app/ps1 mus musculus individual housing feces laboratory vivarium wild-type )2025-10-15v41 / 446pendingNo

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