Experiment ID: 1229

Field Description
namea modified mediterranean-style diet enhances brain function via specific gut-microbiome-brain mechanisms (10936641) - gpt-5-mini
proj_id10936641
sraprjna1011002
date_of_upload15/10/2025 21:04
doi10.1080/19490976.2024.2323752
modelgpt-5-mini

Annotations for experiment:

term enrichment score
TermScore
alzheimer's disease0.400000
mus musculus0.027027
female0.024691
LOWER IN control0.008830
control0.008762
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
alzheimer's disease0.250000
mus musculus0.013699
female0.012500
LOWER IN control0.004545
control0.004444
feces0.002294
Exp. ID User ID Description Date Region Sequences Status Flag
1229na4-week vs 8-week fecal microbiome (mid vs late intervention) ( high in mid-intervention compared to late-intervention in feces female mus musculus alzheimer's disease transgenic app/ps1 individual housing laboratory vivarium wild-type diet intervention (mkd vs wd) )2025-10-15v41 / 3pendingNo
1229na4-week fecal samples (all mice, mid-intervention) (dominant feces, female, mus musculus, alzheimer's disease, transgenic app/ps1, individual housing, laboratory vivarium, wild-type, diet intervention (mkd vs wd), mid-intervention)2025-10-15v41 / 13pendingNo
1229na8-week fecal samples (all mice, late-intervention) (dominant feces, female, mus musculus, alzheimer's disease, transgenic app/ps1, individual housing, laboratory vivarium, wild-type, diet intervention (mkd vs wd), late-intervention)2025-10-15v41 / 13pendingNo
1229naBaseline fecal samples (all mice, time 0) (dominant feces, control, female, mus musculus, alzheimer's disease, transgenic app/ps1, individual housing, baseline, laboratory vivarium, wild-type)2025-10-15v41 / 18pendingNo
1229naAll mouse gut microbiome samples (pooled across timepoints) (dominant feces, female, mus musculus, alzheimer's disease, transgenic app/ps1, individual housing, laboratory vivarium, wild-type, mediterranean-ketogenic diet (mkd), multi-omics (metagenomics, metabolomics), tallahassee, united states, western-style diet (wd), pooled across timepoints)2025-10-15v41 / 19pendingNo
1229na8-week fecal samples (all mice, late-intervention) (common feces, female, mus musculus, alzheimer's disease, transgenic app/ps1, individual housing, laboratory vivarium, wild-type, diet intervention (mkd vs wd), late-intervention)2025-10-15v41 / 83pendingNo
1229naAll mouse gut microbiome samples (pooled across timepoints) (common feces, female, mus musculus, alzheimer's disease, transgenic app/ps1, individual housing, laboratory vivarium, wild-type, mediterranean-ketogenic diet (mkd), multi-omics (metagenomics, metabolomics), tallahassee, united states, western-style diet (wd), pooled across timepoints)2025-10-15v41 / 88pendingNo
1229na4-week fecal samples (all mice, mid-intervention) (common feces, female, mus musculus, alzheimer's disease, transgenic app/ps1, individual housing, laboratory vivarium, wild-type, diet intervention (mkd vs wd), mid-intervention)2025-10-15v41 / 92pendingNo
1229naBaseline fecal samples (all mice, time 0) (common feces, control, female, mus musculus, alzheimer's disease, transgenic app/ps1, individual housing, baseline, laboratory vivarium, wild-type)2025-10-15v41 / 202pendingNo
1229naBaseline vs 4-week fecal microbiome (temporal change early) ( high in control baseline compared to diet intervention (mkd vs wd) mid-intervention in feces female mus musculus alzheimer's disease transgenic app/ps1 individual housing laboratory vivarium wild-type )2025-10-15v41 / 439pendingNo
1229naBaseline vs 4-week fecal microbiome (temporal change early) ( high in diet intervention (mkd vs wd) mid-intervention compared to control baseline in feces female mus musculus alzheimer's disease transgenic app/ps1 individual housing laboratory vivarium wild-type )2025-10-15v41 / 439pendingNo
1229naBaseline vs 8-week fecal microbiome (temporal change late) ( high in control baseline compared to diet intervention (mkd vs wd) late-intervention in feces female mus musculus alzheimer's disease transgenic app/ps1 individual housing laboratory vivarium wild-type )2025-10-15v41 / 445pendingNo
1229naBaseline vs 8-week fecal microbiome (temporal change late) ( high in diet intervention (mkd vs wd) late-intervention compared to control baseline in feces female mus musculus alzheimer's disease transgenic app/ps1 individual housing laboratory vivarium wild-type )2025-10-15v41 / 446pendingNo

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