Experiment ID: 1228

Field Description
namemicrobial community function and bacterial pathogen composition in pit latrines in peri-urban malawi (1069-microbial-community-function-and-bacterial-pathogen-composition-in-pit-latrines-in-peri-urban-malawi-_-plos-water) - gpt-5-mini
proj_id1069-microbial-community-function-and-bacterial-pathogen-composition-in-pit-latrines-in-peri-urban-malawi-_-plos-water
sraprjna913150
date_of_upload15/10/2025 21:02
doi10.1371/journal.pwat.0000171
modelgpt-5-mini

Annotations for experiment:

term enrichment score
TermScore
blantyre city0.500000
pit latrine0.500000
mzuzu city0.500000
bottom layer0.375000
malawi0.333333
LOWER IN bottom layer0.200000
LOWER IN 0.146341
LOWER IN control0.004508
control0.004427
homo sapiens0.002591
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
blantyre city0.333333
pit latrine0.333333
mzuzu city0.333333
bottom layer0.333333
LOWER IN bottom layer0.333333
malawi0.200000
LOWER IN 0.111111
LOWER IN control0.002278
control0.002227
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
blantyre city1.000000
pit latrine1.000000
homo sapiens1.000000
mzuzu city1.000000
feces1.000000
lined pit latrine1.000000
malawi1.000000
bottom layer0.428571
control0.357143
LOWER IN control0.214286
LOWER IN 0.214286
middle layer0.214286
LOWER IN bottom layer0.142857
LOWER IN middle layer0.071429
Number of experiments associating the term to the sequence
TermScore
control1.000000
LOWER IN middle layer1.000000
blantyre city1.000000
pit latrine1.000000
homo sapiens1.000000
mzuzu city1.000000
feces1.000000
lined pit latrine1.000000
malawi1.000000
bottom layer1.000000
LOWER IN control1.000000
LOWER IN 1.000000
LOWER IN bottom layer1.000000
middle layer1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1228naAll deeper samples (Middle + Bottom) — pathogen composition comparison vs Top (dominant blantyre city, pit latrine, bottom layer, homo sapiens, mzuzu city, feces, lined pit latrine, malawi)2025-10-15v31 / 9pendingNo
1228naMid-point (Middle) samples (dominant blantyre city, pit latrine, homo sapiens, mzuzu city, feces, middle layer, lined pit latrine, malawi)2025-10-15v31 / 10pendingNo
1228naMaximum (Bottom) samples (dominant blantyre city, pit latrine, bottom layer, homo sapiens, mzuzu city, feces, lined pit latrine, malawi)2025-10-15v31 / 10pendingNo
1228naSurface (Top) samples (dominant blantyre city, pit latrine, homo sapiens, mzuzu city, feces, , lined pit latrine, control, malawi)2025-10-15v31 / 13pendingNo
1228naSurface (Top) samples (common blantyre city, pit latrine, homo sapiens, mzuzu city, feces, , lined pit latrine, control, malawi)2025-10-15v31 / 126pendingNo
1228naMid-point (Middle) samples (common blantyre city, pit latrine, homo sapiens, mzuzu city, feces, middle layer, lined pit latrine, malawi)2025-10-15v31 / 131pendingNo
1228naAll deeper samples (Middle + Bottom) — pathogen composition comparison vs Top (common blantyre city, pit latrine, bottom layer, homo sapiens, mzuzu city, feces, lined pit latrine, malawi)2025-10-15v31 / 133pendingNo
1228naSurface (Top) vs Maximum (Bottom) — vertical stratification (surface vs bottom) ( high in control compared to bottom layer in blantyre city pit latrine homo sapiens mzuzu city feces lined pit latrine malawi )2025-10-15v31 / 138pendingNo
1228naSurface (Top) vs Maximum (Bottom) — vertical stratification (surface vs bottom) ( high in bottom layer compared to control in blantyre city pit latrine homo sapiens mzuzu city feces lined pit latrine malawi )2025-10-15v31 / 141pendingNo
1228naMaximum (Bottom) samples (common blantyre city, pit latrine, bottom layer, homo sapiens, mzuzu city, feces, lined pit latrine, malawi)2025-10-15v31 / 142pendingNo
1228naSurface (Top) vs Mid-point (Middle) — vertical stratification (surface vs mid-depth) ( high in middle layer compared to control in blantyre city pit latrine homo sapiens mzuzu city feces lined pit latrine malawi )2025-10-15v31 / 275pendingNo
1228naSurface (Top) vs Deeper (Middle + Bottom) — overall community composition and pathogen enrichment ( high in control compared to bottom layer in blantyre city pit latrine homo sapiens mzuzu city feces lined pit latrine malawi )2025-10-15v31 / 281pendingNo
1228naSurface (Top) vs Deeper (Middle + Bottom) — overall community composition and pathogen enrichment ( high in bottom layer compared to control in blantyre city pit latrine homo sapiens mzuzu city feces lined pit latrine malawi )2025-10-15v31 / 287pendingNo
1228naSurface (Top) vs Mid-point (Middle) — vertical stratification (surface vs mid-depth) ( high in control compared to middle layer in blantyre city pit latrine homo sapiens mzuzu city feces lined pit latrine malawi )2025-10-15v31 / 295pendingNo

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