Experiment ID: 1224

Field Description
namevaginal and anal microbiome during chlamydia trachomatis infections (8539191) - gemini-2.0-flash
proj_id8539191
sraprjna764037
date_of_upload15/10/2025 20:15
doi10.3390/pathogens10101347
modelgemini-2.0-flash

Annotations for experiment:

term enrichment score
TermScore
bologna0.400000
young adult stage0.200000
LOWER IN vagina0.190476
LOWER IN rectum0.148148
rectum0.141176
vagina0.112000
italy0.060606
control0.008804
LOWER IN control0.008584
homo sapiens0.005168
Fraction of dbbact annotations with this term covered by the query
TermScore
bologna0.250000
LOWER IN vagina0.250000
LOWER IN rectum0.142857
young adult stage0.111111
rectum0.083333
vagina0.062500
italy0.031250
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
italy1.000000
commune of bologna1.000000
bologna1.000000
province of modena1.000000
young adult stage1.000000
vagina0.538462
chlamydia0.538462
control0.461538
rectum0.461538
anus0.461538
LOWER IN rectum0.153846
LOWER IN anus0.153846
LOWER IN vagina0.153846
LOWER IN control0.076923
Number of experiments associating the term to the sequence
TermScore
vagina1.000000
LOWER IN rectum1.000000
LOWER IN anus1.000000
homo sapiens1.000000
control1.000000
italy1.000000
commune of bologna1.000000
bologna1.000000
province of modena1.000000
young adult stage1.000000
rectum1.000000
anus1.000000
LOWER IN vagina1.000000
chlamydia1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1224naChlamydia trachomatis positive vs negative (vaginal swabs) ( high in chlamydia compared to control in homo sapiens vagina italy commune of bologna bologna province of modena young adult stage )2025-10-15v31 / 3pendingNo
1224naVaginal vs anal swabs (Chlamydia trachomatis positive) ( high in vagina compared to rectum anus in homo sapiens italy chlamydia commune of bologna bologna province of modena young adult stage )2025-10-15v31 / 13pendingNo
1224naVaginal swabs from Chlamydia trachomatis negative subjects (dominant homo sapiens, control, vagina, italy, commune of bologna, bologna, province of modena, young adult stage)2025-10-15v31 / 13pendingNo
1224naVaginal swabs from Chlamydia trachomatis positive subjects (dominant homo sapiens, vagina, italy, chlamydia, commune of bologna, bologna, province of modena, young adult stage)2025-10-15v31 / 17pendingNo
1224naVaginal vs anal swabs (Chlamydia trachomatis positive) ( high in rectum anus compared to vagina in homo sapiens italy chlamydia commune of bologna bologna province of modena young adult stage )2025-10-15v31 / 22pendingNo
1224naAnal swabs from Chlamydia trachomatis positive subjects (dominant homo sapiens, rectum, italy, anus, chlamydia, commune of bologna, bologna, province of modena, young adult stage)2025-10-15v31 / 23pendingNo
1224naAnal swabs from Chlamydia trachomatis negative subjects (dominant homo sapiens, control, rectum, italy, anus, commune of bologna, bologna, province of modena, young adult stage)2025-10-15v31 / 25pendingNo
1224naVaginal swabs from Chlamydia trachomatis negative subjects (common homo sapiens, control, vagina, italy, commune of bologna, bologna, province of modena, young adult stage)2025-10-15v31 / 33pendingNo
1224naVaginal swabs from Chlamydia trachomatis positive subjects (common homo sapiens, vagina, italy, chlamydia, commune of bologna, bologna, province of modena, young adult stage)2025-10-15v31 / 43pendingNo
1224naAnal swabs from Chlamydia trachomatis negative subjects (common homo sapiens, control, rectum, italy, anus, commune of bologna, bologna, province of modena, young adult stage)2025-10-15v31 / 78pendingNo
1224naAnal swabs from Chlamydia trachomatis positive subjects (common homo sapiens, rectum, italy, anus, chlamydia, commune of bologna, bologna, province of modena, young adult stage)2025-10-15v31 / 105pendingNo
1224naVaginal vs anal swabs (Chlamydia trachomatis negative) ( high in rectum anus compared to vagina in homo sapiens control italy commune of bologna bologna province of modena young adult stage )2025-10-15v31 / 143pendingNo
1224naVaginal vs anal swabs (Chlamydia trachomatis negative) ( high in vagina compared to rectum anus in homo sapiens control italy commune of bologna bologna province of modena young adult stage )2025-10-15v31 / 144pendingNo

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