Experiment ID: 1222

Field Description
namebifidobacteria or fiber protect against diet-induced microbiota- mediated colonic mucus deterioration (5764785) - gemini-2.0-flash
proj_id5764785
sraprjeb20367
date_of_upload15/10/2025 20:13
doi10.1016/j.chom.2017.11.004
modelgemini-2.0-flash

Annotations for experiment:

term enrichment score
TermScore
left colon0.400000
sweden0.117647
colon0.083333
mus musculus0.027027
feces0.004576
Fraction of dbbact annotations with this term covered by the query
TermScore
left colon0.250000
sweden0.062500
colon0.043478
mus musculus0.013699
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
colon1.000000
left colon1.000000
mus musculus1.000000
sweden1.000000
city of gothenburg1.000000
feces0.916667
Number of experiments associating the term to the sequence
TermScore
feces1.000000
colon1.000000
left colon1.000000
mus musculus1.000000
sweden1.000000
city of gothenburg1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1222naMice fed Western Diet for 28 days - Distal colon content (dominant feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 13pendingNo
1222naMice fed Western Diet for 3 days - Distal colon content (dominant feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 15pendingNo
1222naMice fed Western Diet for 7 days - Distal colon content (dominant feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 15pendingNo
1222naMice fed Chow diet - Distal colon content (dominant feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 16pendingNo
1222naMice with microbiota transplant from Western Diet fed mice - Distal colon content (dominant feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 16pendingNo
1222naMice fed Western Diet for 0 days - Distal colon content (dominant feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 18pendingNo
1222naMice fed Chow diet - Distal Colon mucosa (dominant colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 19pendingNo
1222naMice fed Western Diet for 14 days - Distal colon content (dominant feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 20pendingNo
1222naMice with microbiota transplant from Chow fed mice - Distal colon content (dominant feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 20pendingNo
1222naMice fed Western Diet for 1 day - Distal colon content (dominant feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 22pendingNo
1222naEffect of microbiota transplant on mice fed Western Diet - Distal colon content ( high in compared to in feces colon left colon mus musculus sweden city of gothenburg )2025-10-15v41 / 32pendingNo
1222naEffect of microbiota transplant on mice fed Western Diet - Distal colon content ( high in compared to in feces colon left colon mus musculus sweden city of gothenburg )2025-10-15v41 / 32pendingNo
1222naMice with microbiota transplant from Western Diet fed mice - Distal colon content (common feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 188pendingNo
1222naMice with microbiota transplant from Chow fed mice - Distal colon content (common feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 195pendingNo
1222naMice fed Western Diet for 3 days - Distal colon content (common feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 196pendingNo
1222naMice fed Western Diet for 28 days - Distal colon content (common feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 198pendingNo
1222naMice fed Western Diet for 7 days - Distal colon content (common feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 211pendingNo
1222naMice fed Western Diet for 14 days - Distal colon content (common feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 217pendingNo
1222naMice fed Western Diet for 0 days - Distal colon content (common feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 218pendingNo
1222naMice fed Chow diet - Distal colon content (common feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 298pendingNo
1222naMice fed Western Diet for 1 day - Distal colon content (common feces, colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 322pendingNo
1222naMice fed Chow diet - Distal Colon mucosa (common colon, left colon, mus musculus, sweden, city of gothenburg)2025-10-15v41 / 324pendingNo
1222naChow diet vs. Western Diet with Chow microbiota transplant - Distal colon content ( high in compared to in feces colon left colon mus musculus sweden city of gothenburg )2025-10-15v41 / 346pendingNo
1222naChow diet vs. Western Diet with Chow microbiota transplant - Distal colon content ( high in compared to in feces colon left colon mus musculus sweden city of gothenburg )2025-10-15v41 / 356pendingNo

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