Experiment ID: 1181

Field Description
nameimpaired gut microbiota-mediated short-chain fatty acid production precedes morbidity and mortality in people with hiv (nihms-1948184)
proj_idnihms-1948184
sraprjna994573
doi10.1016/j.celrep.2023.113336

Annotations for experiment:

term enrichment score
TermScore
amsterdam0.333333
human middle aged stage0.279070
25-44 year-old human stage0.205128
human aged stage0.179775
antiretroviral therapy0.095238
human immunodeficiency virus infectious disease0.090909
human adult stage0.043750
male0.025478
control0.007890
LOWER IN control0.007220
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
antiretroviral therapy0.500000
human immunodeficiency virus infectious disease0.333333
human aged stage0.250000
human middle aged stage0.250000
amsterdam0.200000
25-44 year-old human stage0.200000
human adult stage0.023256
male0.020000
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Exp. ID User ID Description Date Region Sequences Status Flag
1181naFecal samples from individuals aged 59 (dominant 59-year-old human stage, gut wall, human middle aged stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 19pendingNo
1181naFecal samples from individuals aged 67 (dominant gut wall, amsterdam, the netherlands, feces, homo sapiens, 67-year-old human stage, human aged stage)2025-10-15v41 / 19pendingNo
1181naFecal samples from individuals aged 58 (dominant gut wall, human middle aged stage, amsterdam, the netherlands, feces, 58-year-old human stage, homo sapiens)2025-10-15v41 / 20pendingNo
1181naFecal samples from individuals with BMI 21 (dominant human adult stage, gut wall, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 20pendingNo
1181naFecal samples from individuals with BMI 27 (dominant gut wall, 25-44 year-old human stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 21pendingNo
1181naFecal samples from individuals with BMI 28 (dominant gut wall, 25-44 year-old human stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 22pendingNo
1181naFecal samples from individuals with BMI 19 (dominant human adult stage, gut wall, 25-44 year-old human stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 22pendingNo
1181naHIV-positive individuals (dominant gut wall, human adult stage, antiretroviral therapy, amsterdam, the netherlands, feces, blood serum, human immunodeficiency virus infectious disease, homo sapiens)2025-10-15v41 / 22pendingNo
1181naHIV-negative individuals (dominant human adult stage, gut wall, control, amsterdam, the netherlands, feces, blood serum, homo sapiens)2025-10-15v41 / 22pendingNo
1181naFecal samples from individuals aged 51 (dominant gut wall, 51-year-old human stage, human middle aged stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 22pendingNo
1181naFecal samples from individuals aged 52 (dominant gut wall, 52-year-old human stage, human middle aged stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 22pendingNo
1181naFecal samples from individuals aged 61 (dominant gut wall, human middle aged stage, amsterdam, 61-year-old human stage, feces, the netherlands, homo sapiens)2025-10-15v41 / 22pendingNo
1181naFecal samples from individuals aged 62 (dominant gut wall, 62-year-old human stage, human middle aged stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 22pendingNo
1181naFecal samples from individuals aged 63 (dominant 63-year-old human stage, gut wall, human middle aged stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 22pendingNo
1181naFecal samples from individuals aged 66 (dominant 66-year-old human stage, gut wall, amsterdam, the netherlands, feces, homo sapiens, human aged stage)2025-10-15v41 / 22pendingNo
1181naFecal samples from individuals with BMI 24 (dominant human adult stage, gut wall, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 22pendingNo
1181naFecal samples from males (dominant human adult stage, gut wall, male, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 23pendingNo
1181naFecal samples from individuals aged 70 (dominant gut wall, 70-year-old human stage, amsterdam, the netherlands, feces, homo sapiens, human aged stage)2025-10-15v41 / 23pendingNo
1181naFecal samples from individuals with BMI 19 (dominant human adult stage, gut wall, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 23pendingNo
1181naFecal samples from individuals aged 68 (dominant gut wall, 68-year-old human stage, amsterdam, the netherlands, feces, homo sapiens, human aged stage)2025-10-15v41 / 24pendingNo
1181naFecal samples from individuals with BMI 20 (dominant human adult stage, gut wall, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 24pendingNo
1181naFecal samples from individuals with BMI 22 (dominant human adult stage, gut wall, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 24pendingNo
1181naFecal samples from individuals with BMI 23 (dominant human adult stage, gut wall, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 24pendingNo
1181naFecal samples from individuals aged 55 (dominant gut wall, human middle aged stage, amsterdam, the netherlands, feces, 55-year-old human stage, homo sapiens)2025-10-15v41 / 25pendingNo
1181naFecal samples from individuals with BMI 26 (dominant gut wall, 25-44 year-old human stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 25pendingNo
1181naFecal samples from individuals with BMI 29 (dominant gut wall, 25-44 year-old human stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 26pendingNo
1181naFecal samples from individuals aged 50 (dominant gut wall, 50-year-old human stage, human middle aged stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 26pendingNo
1181naFecal samples from individuals with BMI 25 (dominant gut wall, 25-44 year-old human stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 26pendingNo
1181naFecal samples from individuals aged 62 (common gut wall, 62-year-old human stage, human middle aged stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 73pendingNo
1181naFecal samples from individuals with BMI 22 (common human adult stage, gut wall, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 83pendingNo
1181naHIV-positive individuals (common gut wall, human adult stage, antiretroviral therapy, amsterdam, the netherlands, feces, blood serum, human immunodeficiency virus infectious disease, homo sapiens)2025-10-15v41 / 95pendingNo
1181naFecal samples from individuals with BMI 19 (common human adult stage, gut wall, 25-44 year-old human stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 102pendingNo
1181naFecal samples from individuals aged 61 (common gut wall, human middle aged stage, amsterdam, 61-year-old human stage, feces, the netherlands, homo sapiens)2025-10-15v41 / 102pendingNo
1181naFecal samples from individuals aged 55 (common gut wall, human middle aged stage, amsterdam, the netherlands, feces, 55-year-old human stage, homo sapiens)2025-10-15v41 / 105pendingNo
1181naFecal samples from males (common human adult stage, gut wall, male, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 106pendingNo
1181naFecal samples from individuals with BMI 23 (common human adult stage, gut wall, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 116pendingNo
1181naFecal samples from individuals with BMI 25 (common gut wall, 25-44 year-old human stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 117pendingNo
1181naFecal samples from individuals with BMI 26 (common gut wall, 25-44 year-old human stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 118pendingNo
1181naFecal samples from individuals with BMI 19 (common human adult stage, gut wall, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 122pendingNo
1181naFecal samples from individuals aged 58 (common gut wall, human middle aged stage, amsterdam, the netherlands, feces, 58-year-old human stage, homo sapiens)2025-10-15v41 / 123pendingNo
1181naFecal samples from individuals with BMI 28 (common gut wall, 25-44 year-old human stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 127pendingNo
1181naFecal samples from individuals aged 66 (common 66-year-old human stage, gut wall, amsterdam, the netherlands, feces, homo sapiens, human aged stage)2025-10-15v41 / 129pendingNo
1181naFecal samples from individuals with BMI 20 (common human adult stage, gut wall, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 129pendingNo
1181naFecal samples from individuals with BMI 27 (common gut wall, 25-44 year-old human stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 133pendingNo
1181naFecal samples from individuals with BMI 29 (common gut wall, 25-44 year-old human stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 138pendingNo
1181naFecal samples from individuals aged 52 (common gut wall, 52-year-old human stage, human middle aged stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 139pendingNo
1181naFecal samples from individuals aged 63 (common 63-year-old human stage, gut wall, human middle aged stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 143pendingNo
1181naFecal samples from individuals aged 50 (common gut wall, 50-year-old human stage, human middle aged stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 145pendingNo
1181naFecal samples from individuals aged 59 (common 59-year-old human stage, gut wall, human middle aged stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 145pendingNo
1181naHIV-negative individuals (common human adult stage, gut wall, control, amsterdam, the netherlands, feces, blood serum, homo sapiens)2025-10-15v41 / 149pendingNo
1181naFecal samples from individuals aged 70 (common gut wall, 70-year-old human stage, amsterdam, the netherlands, feces, homo sapiens, human aged stage)2025-10-15v41 / 156pendingNo
1181naFecal samples from individuals with BMI 21 (common human adult stage, gut wall, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 160pendingNo
1181naFecal samples from individuals aged 68 (common gut wall, 68-year-old human stage, amsterdam, the netherlands, feces, homo sapiens, human aged stage)2025-10-15v41 / 165pendingNo
1181naFecal samples from individuals aged 51 (common gut wall, 51-year-old human stage, human middle aged stage, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 166pendingNo
1181naFecal samples from individuals with BMI 24 (common human adult stage, gut wall, amsterdam, the netherlands, feces, homo sapiens)2025-10-15v41 / 182pendingNo
1181naFecal samples from individuals aged 67 (common gut wall, amsterdam, the netherlands, feces, homo sapiens, 67-year-old human stage, human aged stage)2025-10-15v41 / 191pendingNo
1181naHIV-positive vs HIV-negative individuals ( high in antiretroviral therapy human immunodeficiency virus infectious disease compared to control in human adult stage gut wall amsterdam the netherlands feces blood serum homo sapiens )2025-10-15v41 / 250pendingNo

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