Experiment ID: 1177

Field Description
nameimpaired gut microbiota-mediated short-chain fatty acid production precedes morbidity and mortality in people with hiv (nihms-1948184)
proj_idnihms-1948184
sraprjna994573
doi10.1016/j.celrep.2023.113336

Annotations for experiment:

term enrichment score
TermScore
amsterdam0.200000
human middle aged stage0.190476
25-44 year-old human stage0.140351
human aged stage0.134454
antiretroviral therapy0.128205
human immunodeficiency virus infectious disease0.113636
human adult stage0.022901
male0.017429
control0.004303
LOWER IN control0.003984
homo sapiens0.002591
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
antiretroviral therapy0.333333
human immunodeficiency virus infectious disease0.200000
human aged stage0.142857
human middle aged stage0.142857
amsterdam0.111111
25-44 year-old human stage0.111111
human adult stage0.011765
male0.010101
LOWER IN control0.002278
control0.002227
homo sapiens0.001297
feces0.001148
Exp. ID User ID Description Date Region Sequences Status Flag
1177naFecal samples from individuals aged 59 (dominant the netherlands, 59-year-old human stage, feces, human middle aged stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 19pendingNo
1177naFecal samples from individuals aged 67 (dominant the netherlands, feces, 67-year-old human stage, amsterdam, homo sapiens, gut wall, human aged stage)2025-10-15v41 / 19pendingNo
1177naFecal samples from individuals aged 58 (dominant the netherlands, 58-year-old human stage, feces, human middle aged stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 20pendingNo
1177naFecal samples from individuals with BMI 21 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 20pendingNo
1177naFecal samples from individuals with BMI 27 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 21pendingNo
1177naHIV-positive individuals (dominant the netherlands, human adult stage, feces, amsterdam, human immunodeficiency virus infectious disease, homo sapiens, antiretroviral therapy, gut wall, blood serum)2025-10-15v41 / 22pendingNo
1177naHIV-negative individuals (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall, blood serum, control)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals aged 51 (dominant the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 51-year-old human stage)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals aged 52 (dominant the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 52-year-old human stage)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals aged 61 (dominant the netherlands, 61-year-old human stage, feces, human middle aged stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals aged 62 (dominant the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 62-year-old human stage)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals aged 63 (dominant the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, 63-year-old human stage, gut wall)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals aged 66 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 66-year-old human stage, human aged stage)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals with BMI 24 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals with BMI 28 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 22pendingNo
1177naHIV-positive individuals (dominant the netherlands, human adult stage, feces, amsterdam, human immunodeficiency virus infectious disease, homo sapiens, antiretroviral therapy, gut wall, blood serum)2025-10-15v41 / 22pendingNo
1177naHIV-negative individuals (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall, blood serum, control)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals with BMI 19 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 22pendingNo
1177naFecal samples from males (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, male, gut wall)2025-10-15v41 / 23pendingNo
1177naFecal samples from individuals aged 70 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 70-year-old human stage, human aged stage)2025-10-15v41 / 23pendingNo
1177naFecal samples from individuals with BMI 19 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 23pendingNo
1177naFecal samples from males (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, male, gut wall)2025-10-15v41 / 23pendingNo
1177naFecal samples from individuals aged 68 (dominant the netherlands, feces, 68-year-old human stage, amsterdam, homo sapiens, gut wall, human aged stage)2025-10-15v41 / 24pendingNo
1177naFecal samples from individuals with BMI 20 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 24pendingNo
1177naFecal samples from individuals with BMI 22 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 24pendingNo
1177naFecal samples from individuals with BMI 23 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 24pendingNo
1177naFecal samples from individuals aged 55 (dominant the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 55-year-old human stage)2025-10-15v41 / 25pendingNo
1177naFecal samples from individuals with BMI 26 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 25pendingNo
1177naFecal samples from individuals aged 50 (dominant the netherlands, feces, human middle aged stage, 50-year-old human stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 26pendingNo
1177naFecal samples from individuals with BMI 25 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 26pendingNo
1177naFecal samples from individuals with BMI 29 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 26pendingNo
1177naFecal samples from individuals aged 62 (common the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 62-year-old human stage)2025-10-15v41 / 73pendingNo
1177naFecal samples from individuals with BMI 22 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 83pendingNo
1177naHIV-positive individuals (common the netherlands, human adult stage, feces, amsterdam, human immunodeficiency virus infectious disease, homo sapiens, antiretroviral therapy, gut wall, blood serum)2025-10-15v41 / 95pendingNo
1177naHIV-positive individuals (common the netherlands, human adult stage, feces, amsterdam, human immunodeficiency virus infectious disease, homo sapiens, antiretroviral therapy, gut wall, blood serum)2025-10-15v41 / 95pendingNo
1177naFecal samples from individuals aged 61 (common the netherlands, 61-year-old human stage, feces, human middle aged stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 102pendingNo
1177naFecal samples from individuals with BMI 19 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 102pendingNo
1177naFecal samples from individuals aged 55 (common the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 55-year-old human stage)2025-10-15v41 / 105pendingNo
1177naFecal samples from males (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, male, gut wall)2025-10-15v41 / 106pendingNo
1177naFecal samples from males (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, male, gut wall)2025-10-15v41 / 106pendingNo
1177naFecal samples from individuals with BMI 23 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 116pendingNo
1177naFecal samples from individuals with BMI 25 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 117pendingNo
1177naFecal samples from individuals with BMI 26 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 118pendingNo
1177naFecal samples from individuals with BMI 19 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 122pendingNo
1177naFecal samples from individuals aged 58 (common the netherlands, 58-year-old human stage, feces, human middle aged stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 123pendingNo
1177naFecal samples from individuals with BMI 28 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 127pendingNo
1177naFecal samples from individuals aged 66 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 66-year-old human stage, human aged stage)2025-10-15v41 / 129pendingNo
1177naFecal samples from individuals with BMI 20 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 129pendingNo
1177naFecal samples from individuals with BMI 27 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 133pendingNo
1177naFecal samples from individuals with BMI 29 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 138pendingNo
1177naFecal samples from individuals aged 52 (common the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 52-year-old human stage)2025-10-15v41 / 139pendingNo
1177naFecal samples from individuals aged 63 (common the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, 63-year-old human stage, gut wall)2025-10-15v41 / 143pendingNo
1177naFecal samples from individuals aged 50 (common the netherlands, feces, human middle aged stage, 50-year-old human stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 145pendingNo
1177naFecal samples from individuals aged 59 (common the netherlands, 59-year-old human stage, feces, human middle aged stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 145pendingNo
1177naHIV-negative individuals (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall, blood serum, control)2025-10-15v41 / 149pendingNo
1177naHIV-negative individuals (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall, blood serum, control)2025-10-15v41 / 149pendingNo
1177naFecal samples from individuals aged 70 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 70-year-old human stage, human aged stage)2025-10-15v41 / 156pendingNo
1177naFecal samples from individuals with BMI 21 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 160pendingNo
1177naFecal samples from individuals aged 68 (common the netherlands, feces, 68-year-old human stage, amsterdam, homo sapiens, gut wall, human aged stage)2025-10-15v41 / 165pendingNo
1177naFecal samples from individuals aged 51 (common the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 51-year-old human stage)2025-10-15v41 / 166pendingNo
1177naFecal samples from individuals with BMI 24 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 182pendingNo
1177naFecal samples from individuals aged 67 (common the netherlands, feces, 67-year-old human stage, amsterdam, homo sapiens, gut wall, human aged stage)2025-10-15v41 / 191pendingNo
1177naHIV-positive vs HIV-negative individuals ( high in antiretroviral therapy human immunodeficiency virus infectious disease compared to control in the netherlands human adult stage feces amsterdam homo sapiens gut wall blood serum )2025-10-15v41 / 229pendingNo

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