Experiment ID: 1177

Field Description
nameimpaired gut microbiota-mediated short-chain fatty acid production precedes morbidity and mortality in people with hiv (nihms-1948184)
proj_idnihms-1948184
sraprjna994573
doi10.1016/j.celrep.2023.113336

Annotations for experiment:

term enrichment score
TermScore
amsterdam0.333333
human middle aged stage0.266667
25-44 year-old human stage0.195122
human aged stage0.168421
antiretroviral therapy0.136986
human immunodeficiency virus infectious disease0.128205
human adult stage0.044118
male0.030418
control0.008307
LOWER IN control0.007067
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
antiretroviral therapy0.500000
human immunodeficiency virus infectious disease0.333333
human aged stage0.250000
human middle aged stage0.250000
amsterdam0.200000
25-44 year-old human stage0.200000
human adult stage0.023256
male0.020000
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Exp. ID User ID Description Date Region Sequences Status Flag
1177naFecal samples from individuals aged 59 (dominant the netherlands, 59-year-old human stage, feces, human middle aged stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 19pendingNo
1177naFecal samples from individuals aged 67 (dominant the netherlands, feces, 67-year-old human stage, amsterdam, homo sapiens, gut wall, human aged stage)2025-10-15v41 / 19pendingNo
1177naFecal samples from individuals aged 58 (dominant the netherlands, 58-year-old human stage, feces, human middle aged stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 20pendingNo
1177naFecal samples from individuals with BMI 21 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 20pendingNo
1177naFecal samples from individuals with BMI 27 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 21pendingNo
1177naHIV-positive individuals (dominant the netherlands, human adult stage, feces, amsterdam, human immunodeficiency virus infectious disease, homo sapiens, antiretroviral therapy, gut wall, blood serum)2025-10-15v41 / 22pendingNo
1177naHIV-negative individuals (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall, blood serum, control)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals aged 51 (dominant the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 51-year-old human stage)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals aged 52 (dominant the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 52-year-old human stage)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals aged 61 (dominant the netherlands, 61-year-old human stage, feces, human middle aged stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals aged 62 (dominant the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 62-year-old human stage)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals aged 63 (dominant the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, 63-year-old human stage, gut wall)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals aged 66 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 66-year-old human stage, human aged stage)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals with BMI 24 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals with BMI 28 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 22pendingNo
1177naHIV-positive individuals (dominant the netherlands, human adult stage, feces, amsterdam, human immunodeficiency virus infectious disease, homo sapiens, antiretroviral therapy, gut wall, blood serum)2025-10-15v41 / 22pendingNo
1177naHIV-negative individuals (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall, blood serum, control)2025-10-15v41 / 22pendingNo
1177naFecal samples from individuals with BMI 19 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 22pendingNo
1177naFecal samples from males (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, male, gut wall)2025-10-15v41 / 23pendingNo
1177naFecal samples from individuals aged 70 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 70-year-old human stage, human aged stage)2025-10-15v41 / 23pendingNo
1177naFecal samples from individuals with BMI 19 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 23pendingNo
1177naFecal samples from males (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, male, gut wall)2025-10-15v41 / 23pendingNo
1177naFecal samples from individuals aged 68 (dominant the netherlands, feces, 68-year-old human stage, amsterdam, homo sapiens, gut wall, human aged stage)2025-10-15v41 / 24pendingNo
1177naFecal samples from individuals with BMI 20 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 24pendingNo
1177naFecal samples from individuals with BMI 22 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 24pendingNo
1177naFecal samples from individuals with BMI 23 (dominant the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 24pendingNo
1177naFecal samples from individuals aged 55 (dominant the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 55-year-old human stage)2025-10-15v41 / 25pendingNo
1177naFecal samples from individuals with BMI 26 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 25pendingNo
1177naFecal samples from individuals aged 50 (dominant the netherlands, feces, human middle aged stage, 50-year-old human stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 26pendingNo
1177naFecal samples from individuals with BMI 25 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 26pendingNo
1177naFecal samples from individuals with BMI 29 (dominant the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 26pendingNo
1177naFecal samples from individuals aged 62 (common the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 62-year-old human stage)2025-10-15v41 / 73pendingNo
1177naFecal samples from individuals with BMI 22 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 83pendingNo
1177naHIV-positive individuals (common the netherlands, human adult stage, feces, amsterdam, human immunodeficiency virus infectious disease, homo sapiens, antiretroviral therapy, gut wall, blood serum)2025-10-15v41 / 95pendingNo
1177naHIV-positive individuals (common the netherlands, human adult stage, feces, amsterdam, human immunodeficiency virus infectious disease, homo sapiens, antiretroviral therapy, gut wall, blood serum)2025-10-15v41 / 95pendingNo
1177naFecal samples from individuals aged 61 (common the netherlands, 61-year-old human stage, feces, human middle aged stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 102pendingNo
1177naFecal samples from individuals with BMI 19 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 102pendingNo
1177naFecal samples from individuals aged 55 (common the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 55-year-old human stage)2025-10-15v41 / 105pendingNo
1177naFecal samples from males (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, male, gut wall)2025-10-15v41 / 106pendingNo
1177naFecal samples from males (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, male, gut wall)2025-10-15v41 / 106pendingNo
1177naFecal samples from individuals with BMI 23 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 116pendingNo
1177naFecal samples from individuals with BMI 25 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 117pendingNo
1177naFecal samples from individuals with BMI 26 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 118pendingNo
1177naFecal samples from individuals with BMI 19 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 122pendingNo
1177naFecal samples from individuals aged 58 (common the netherlands, 58-year-old human stage, feces, human middle aged stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 123pendingNo
1177naFecal samples from individuals with BMI 28 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 127pendingNo
1177naFecal samples from individuals aged 66 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 66-year-old human stage, human aged stage)2025-10-15v41 / 129pendingNo
1177naFecal samples from individuals with BMI 20 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 129pendingNo
1177naFecal samples from individuals with BMI 27 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 133pendingNo
1177naFecal samples from individuals with BMI 29 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 25-44 year-old human stage)2025-10-15v41 / 138pendingNo
1177naFecal samples from individuals aged 52 (common the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 52-year-old human stage)2025-10-15v41 / 139pendingNo
1177naFecal samples from individuals aged 63 (common the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, 63-year-old human stage, gut wall)2025-10-15v41 / 143pendingNo
1177naFecal samples from individuals aged 50 (common the netherlands, feces, human middle aged stage, 50-year-old human stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 145pendingNo
1177naFecal samples from individuals aged 59 (common the netherlands, 59-year-old human stage, feces, human middle aged stage, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 145pendingNo
1177naHIV-negative individuals (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall, blood serum, control)2025-10-15v41 / 149pendingNo
1177naHIV-negative individuals (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall, blood serum, control)2025-10-15v41 / 149pendingNo
1177naFecal samples from individuals aged 70 (common the netherlands, feces, amsterdam, homo sapiens, gut wall, 70-year-old human stage, human aged stage)2025-10-15v41 / 156pendingNo
1177naFecal samples from individuals with BMI 21 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 160pendingNo
1177naFecal samples from individuals aged 68 (common the netherlands, feces, 68-year-old human stage, amsterdam, homo sapiens, gut wall, human aged stage)2025-10-15v41 / 165pendingNo
1177naFecal samples from individuals aged 51 (common the netherlands, feces, human middle aged stage, amsterdam, homo sapiens, gut wall, 51-year-old human stage)2025-10-15v41 / 166pendingNo
1177naFecal samples from individuals with BMI 24 (common the netherlands, human adult stage, feces, amsterdam, homo sapiens, gut wall)2025-10-15v41 / 182pendingNo
1177naFecal samples from individuals aged 67 (common the netherlands, feces, 67-year-old human stage, amsterdam, homo sapiens, gut wall, human aged stage)2025-10-15v41 / 191pendingNo
1177naHIV-positive vs HIV-negative individuals ( high in antiretroviral therapy human immunodeficiency virus infectious disease compared to control in the netherlands human adult stage feces amsterdam homo sapiens gut wall blood serum )2025-10-15v41 / 229pendingNo

Problems / suggestions? Please visit the dbBact forum