Experiment ID: 1172

Field Description
namebifidobacteria or fiber protect against diet-induced microbiota- mediated colonic mucus deterioration (5764785)
proj_id5764785
sraprjeb20367
doi10.1016/j.chom.2017.11.004

Annotations for experiment:

term enrichment score
TermScore
left colon0.400000
sweden0.117647
colon0.083333
mus musculus0.027027
feces0.004576
Fraction of dbbact annotations with this term covered by the query
TermScore
left colon0.250000
sweden0.062500
colon0.043478
mus musculus0.013699
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
colon1.000000
left colon1.000000
sweden1.000000
city of gothenburg1.000000
mus musculus1.000000
feces0.909091
Number of experiments associating the term to the sequence
TermScore
colon1.000000
left colon1.000000
feces1.000000
sweden1.000000
city of gothenburg1.000000
mus musculus1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1172naMice fed Western Diet for 28 days - Distal colon content (dominant colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 13pendingNo
1172naMice fed Western Diet for 3 days - Distal colon content (dominant colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 15pendingNo
1172naMice fed Western Diet for 7 days - Distal colon content (dominant colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 15pendingNo
1172naMice with microbiota transplant from Western Diet fed mice - Distal colon content (dominant colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 16pendingNo
1172naMice fed Chow diet - Distal colon content (dominant colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 16pendingNo
1172naMice fed Western Diet for 0 days - Distal colon content (dominant colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 18pendingNo
1172naMice fed Chow diet - Distal Colon mucosa (dominant colon, left colon, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 19pendingNo
1172naMice fed Western Diet for 14 days - Distal colon content (dominant colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 20pendingNo
1172naMice with microbiota transplant from Chow fed mice - Distal colon content (dominant colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 20pendingNo
1172naMice fed Western Diet for 1 day - Distal colon content (dominant colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 22pendingNo
1172naEffect of microbiota transplant on mice fed Western Diet - Distal colon content ( high in compared to in colon left colon feces sweden city of gothenburg mus musculus )2025-10-15v41 / 33pendingNo
1172naMice with microbiota transplant from Western Diet fed mice - Distal colon content (common colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 188pendingNo
1172naMice with microbiota transplant from Chow fed mice - Distal colon content (common colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 195pendingNo
1172naMice fed Western Diet for 3 days - Distal colon content (common colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 196pendingNo
1172naMice fed Western Diet for 28 days - Distal colon content (common colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 198pendingNo
1172naMice fed Western Diet for 7 days - Distal colon content (common colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 211pendingNo
1172naMice fed Western Diet for 14 days - Distal colon content (common colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 217pendingNo
1172naMice fed Western Diet for 0 days - Distal colon content (common colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 218pendingNo
1172naMice fed Chow diet - Distal colon content (common colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 298pendingNo
1172naMice fed Western Diet for 1 day - Distal colon content (common colon, left colon, feces, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 322pendingNo
1172naMice fed Chow diet - Distal Colon mucosa (common colon, left colon, sweden, city of gothenburg, mus musculus)2025-10-15v41 / 324pendingNo
1172naChow diet vs. Western Diet with Chow microbiota transplant - Distal colon content ( high in compared to in colon left colon feces sweden city of gothenburg mus musculus )2025-10-15v41 / 350pendingNo

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