Experiment ID: 1168

Field Description
namegut-microbiota-based ensemble model predicts prognosis of pediatric inflammatory bowel disease (11650326)
proj_id11650326
sraprjna917086
doi10.1016/j.isci.2024.111442

Annotations for experiment:

term enrichment score
TermScore
seoul0.400000
inflammatory bowel disease0.151515
adolescent stage0.142857
irritable bowel syndrome0.121212
south korea0.100000
ileum0.090909
colon0.080808
ulcerative colitis0.080000
crohn's disease0.076923
LOWER IN irritable bowel syndrome0.074074
LOWER IN control0.008879
control0.008493
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
seoul0.250000
LOWER IN irritable bowel syndrome0.166667
irritable bowel syndrome0.166667
inflammatory bowel disease0.111111
adolescent stage0.076923
ileum0.052632
south korea0.052632
ulcerative colitis0.045455
colon0.043478
crohn's disease0.043478
LOWER IN control0.004545
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
homo sapiens1.000000
seoul1.000000
south korea1.000000
adolescent stage1.000000
colon0.571429
ileum0.333333
crohn's disease0.333333
ulcerative colitis0.333333
inflammatory bowel disease0.238095
LOWER IN control0.190476
tumor necrosis factor-alpha0.142857
control0.095238
irritable bowel syndrome0.095238
LOWER IN irritable bowel syndrome0.047619
Number of experiments associating the term to the sequence
TermScore
colon1.000000
ileum1.000000
crohn's disease1.000000
ulcerative colitis1.000000
LOWER IN control1.000000
feces1.000000
homo sapiens1.000000
seoul1.000000
south korea1.000000
adolescent stage1.000000
control1.000000
LOWER IN irritable bowel syndrome1.000000
irritable bowel syndrome1.000000
inflammatory bowel disease1.000000
tumor necrosis factor-alpha1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1168naUC Active (dominant feces, homo sapiens, colon, seoul, ulcerative colitis, south korea, adolescent stage)2025-10-15v31 / 16pendingNo
1168naFunctional Gastrointestinal Disorders (FGID) (dominant feces, homo sapiens, seoul, irritable bowel syndrome, south korea, adolescent stage)2025-10-15v31 / 18pendingNo
1168naUC (all disease states) vs Healthy Controls ( high in colon ulcerative colitis compared to control in feces homo sapiens seoul south korea adolescent stage )2025-10-15v31 / 18pendingNo
1168naPatients on Anti-TNF alpha therapy (dominant feces, homo sapiens, seoul, tumor necrosis factor-alpha, inflammatory bowel disease, south korea, adolescent stage)2025-10-15v31 / 19pendingNo
1168naHealthy Controls (dominant feces, homo sapiens, control, seoul, south korea, adolescent stage)2025-10-15v31 / 20pendingNo
1168naUC Remission (dominant feces, homo sapiens, colon, seoul, ulcerative colitis, south korea, adolescent stage)2025-10-15v31 / 21pendingNo
1168naCD Remission (dominant feces, homo sapiens, colon, ileum, seoul, crohn's disease, south korea, adolescent stage)2025-10-15v31 / 24pendingNo
1168naCalprotectin > 2000 (dominant feces, homo sapiens, seoul, inflammatory bowel disease, south korea, adolescent stage)2025-10-15v31 / 26pendingNo
1168naCD Active (common feces, homo sapiens, colon, ileum, seoul, crohn's disease, south korea, adolescent stage)2025-10-15v31 / 28pendingNo
1168naCD Active (dominant feces, homo sapiens, colon, ileum, seoul, crohn's disease, south korea, adolescent stage)2025-10-15v31 / 28pendingNo
1168naCD Remission (common feces, homo sapiens, colon, ileum, seoul, crohn's disease, south korea, adolescent stage)2025-10-15v31 / 32pendingNo
1168naUC Active (common feces, homo sapiens, colon, seoul, ulcerative colitis, south korea, adolescent stage)2025-10-15v31 / 33pendingNo
1168naPatients on Anti-TNF alpha therapy vs Healthy Controls ( high in tumor necrosis factor-alpha inflammatory bowel disease compared to control in feces homo sapiens seoul south korea adolescent stage )2025-10-15v31 / 35pendingNo
1168naPatients on Anti-TNF alpha therapy (common feces, homo sapiens, seoul, tumor necrosis factor-alpha, inflammatory bowel disease, south korea, adolescent stage)2025-10-15v31 / 36pendingNo
1168naCalprotectin > 2000 (common feces, homo sapiens, seoul, inflammatory bowel disease, south korea, adolescent stage)2025-10-15v31 / 43pendingNo
1168naUC Remission (common feces, homo sapiens, colon, seoul, ulcerative colitis, south korea, adolescent stage)2025-10-15v31 / 47pendingNo
1168naFunctional Gastrointestinal Disorders (FGID) (common feces, homo sapiens, seoul, irritable bowel syndrome, south korea, adolescent stage)2025-10-15v31 / 51pendingNo
1168naIBD (CD & UC, all disease states) vs FGID ( high in colon ileum crohn's disease ulcerative colitis compared to irritable bowel syndrome in feces homo sapiens seoul south korea adolescent stage )2025-10-15v31 / 54pendingNo
1168naHealthy Controls (common feces, homo sapiens, control, seoul, south korea, adolescent stage)2025-10-15v31 / 61pendingNo
1168naCD (all disease states) vs Healthy Controls ( high in colon ileum crohn's disease compared to control in feces homo sapiens seoul south korea adolescent stage )2025-10-15v31 / 110pendingNo
1168naIBD (CD & UC, all disease states) vs Healthy Controls ( high in colon ileum crohn's disease ulcerative colitis compared to control in feces homo sapiens seoul south korea adolescent stage )2025-10-15v31 / 115pendingNo

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