Experiment ID: 1151

Field Description
nameimpaired gut microbiota-mediated short-chain fatty acid production precedes morbidity and mortality in people with hiv (nihms-1948184)
proj_idnihms-1948184
sraprjna994573
doi10.1016/j.celrep.2023.113336

Annotations for experiment:

term enrichment score
TermScore
amsterdam0.333333
human middle aged stage0.276923
25-44 year-old human stage0.203390
human aged stage0.177778
human adult stage0.043825
male0.031008
control0.008351
homo sapiens0.005168
feces0.004577
Fraction of dbbact annotations with this term covered by the query
TermScore
human aged stage0.250000
human middle aged stage0.250000
amsterdam0.200000
25-44 year-old human stage0.200000
human adult stage0.023256
male0.020000
control0.004444
homo sapiens0.002591
feces0.002294
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
homo sapiens1.000000
amsterdam1.000000
gut wall1.000000
the netherlands1.000000
human adult stage0.379310
human middle aged stage0.310345
25-44 year-old human stage0.206897
human aged stage0.137931
control0.068966
blood serum0.068966
male0.068966
67-year-old human stage0.034483
51-year-old human stage0.034483
68-year-old human stage0.034483
70-year-old human stage0.034483
50-year-old human stage0.034483
59-year-old human stage0.034483
63-year-old human stage0.034483
52-year-old human stage0.034483
66-year-old human stage0.034483
58-year-old human stage0.034483
55-year-old human stage0.034483
61-year-old human stage0.034483
62-year-old human stage0.034483
Exp. ID User ID Description Date Region Sequences Status Flag
1151naFecal samples from individuals aged 59 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 59-year-old human stage)2025-10-15v41 / 19pendingNo
1151naFecal samples from individuals aged 67 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human aged stage, 67-year-old human stage)2025-10-15v41 / 19pendingNo
1151naFecal samples from individuals with BMI 21 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage)2025-10-15v41 / 20pendingNo
1151naFecal samples from individuals aged 58 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 58-year-old human stage)2025-10-15v41 / 20pendingNo
1151naFecal samples from individuals with BMI 27 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, 25-44 year-old human stage)2025-10-15v41 / 21pendingNo
1151naFecal samples from individuals with BMI 24 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage)2025-10-15v41 / 22pendingNo
1151naFecal samples from individuals with BMI 28 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, 25-44 year-old human stage)2025-10-15v41 / 22pendingNo
1151naHIV-negative individuals (dominant feces, homo sapiens, control, amsterdam, gut wall, blood serum, the netherlands, human adult stage)2025-10-15v41 / 22pendingNo
1151naFecal samples from individuals with BMI 19 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage, 25-44 year-old human stage)2025-10-15v41 / 22pendingNo
1151naHIV-negative individuals (dominant feces, homo sapiens, control, amsterdam, gut wall, blood serum, the netherlands, human adult stage)2025-10-15v41 / 22pendingNo
1151naFecal samples from individuals aged 51 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 51-year-old human stage)2025-10-15v41 / 22pendingNo
1151naFecal samples from individuals aged 52 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 52-year-old human stage)2025-10-15v41 / 22pendingNo
1151naFecal samples from individuals aged 61 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 61-year-old human stage)2025-10-15v41 / 22pendingNo
1151naFecal samples from individuals aged 62 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 62-year-old human stage)2025-10-15v41 / 22pendingNo
1151naFecal samples from individuals aged 63 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 63-year-old human stage)2025-10-15v41 / 22pendingNo
1151naFecal samples from individuals aged 66 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human aged stage, 66-year-old human stage)2025-10-15v41 / 22pendingNo
1151naFecal samples from males (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, male, human adult stage)2025-10-15v41 / 23pendingNo
1151naFecal samples from males (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, male, human adult stage)2025-10-15v41 / 23pendingNo
1151naFecal samples from individuals aged 70 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human aged stage, 70-year-old human stage)2025-10-15v41 / 23pendingNo
1151naFecal samples from individuals with BMI 19 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage)2025-10-15v41 / 23pendingNo
1151naFecal samples from individuals with BMI 22 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage)2025-10-15v41 / 24pendingNo
1151naFecal samples from individuals with BMI 23 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage)2025-10-15v41 / 24pendingNo
1151naFecal samples from individuals aged 68 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human aged stage, 68-year-old human stage)2025-10-15v41 / 24pendingNo
1151naFecal samples from individuals with BMI 20 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage)2025-10-15v41 / 24pendingNo
1151naFecal samples from individuals with BMI 26 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, 25-44 year-old human stage)2025-10-15v41 / 25pendingNo
1151naFecal samples from individuals aged 55 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 55-year-old human stage)2025-10-15v41 / 25pendingNo
1151naFecal samples from individuals with BMI 25 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, 25-44 year-old human stage)2025-10-15v41 / 26pendingNo
1151naFecal samples from individuals with BMI 29 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, 25-44 year-old human stage)2025-10-15v41 / 26pendingNo
1151naFecal samples from individuals aged 50 (dominant feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 50-year-old human stage)2025-10-15v41 / 26pendingNo
1151naFecal samples from individuals aged 62 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 62-year-old human stage)2025-10-15v41 / 73pendingNo
1151naFecal samples from individuals with BMI 22 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage)2025-10-15v41 / 83pendingNo
1151naFecal samples from individuals with BMI 19 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage, 25-44 year-old human stage)2025-10-15v41 / 102pendingNo
1151naFecal samples from individuals aged 61 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 61-year-old human stage)2025-10-15v41 / 102pendingNo
1151naFecal samples from individuals aged 55 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 55-year-old human stage)2025-10-15v41 / 105pendingNo
1151naFecal samples from males (common feces, homo sapiens, amsterdam, gut wall, the netherlands, male, human adult stage)2025-10-15v41 / 106pendingNo
1151naFecal samples from males (common feces, homo sapiens, amsterdam, gut wall, the netherlands, male, human adult stage)2025-10-15v41 / 106pendingNo
1151naFecal samples from individuals with BMI 23 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage)2025-10-15v41 / 116pendingNo
1151naFecal samples from individuals with BMI 25 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, 25-44 year-old human stage)2025-10-15v41 / 117pendingNo
1151naFecal samples from individuals with BMI 26 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, 25-44 year-old human stage)2025-10-15v41 / 118pendingNo
1151naFecal samples from individuals with BMI 19 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage)2025-10-15v41 / 122pendingNo
1151naFecal samples from individuals aged 58 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 58-year-old human stage)2025-10-15v41 / 123pendingNo
1151naFecal samples from individuals with BMI 28 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, 25-44 year-old human stage)2025-10-15v41 / 127pendingNo
1151naFecal samples from individuals aged 66 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human aged stage, 66-year-old human stage)2025-10-15v41 / 129pendingNo
1151naFecal samples from individuals with BMI 20 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage)2025-10-15v41 / 129pendingNo
1151naFecal samples from individuals with BMI 27 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, 25-44 year-old human stage)2025-10-15v41 / 133pendingNo
1151naFecal samples from individuals with BMI 29 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, 25-44 year-old human stage)2025-10-15v41 / 138pendingNo
1151naFecal samples from individuals aged 52 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 52-year-old human stage)2025-10-15v41 / 139pendingNo
1151naFecal samples from individuals aged 63 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 63-year-old human stage)2025-10-15v41 / 143pendingNo
1151naFecal samples from individuals aged 50 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 50-year-old human stage)2025-10-15v41 / 145pendingNo
1151naFecal samples from individuals aged 59 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 59-year-old human stage)2025-10-15v41 / 145pendingNo
1151naHIV-negative individuals (common feces, homo sapiens, control, amsterdam, gut wall, blood serum, the netherlands, human adult stage)2025-10-15v41 / 149pendingNo
1151naHIV-negative individuals (common feces, homo sapiens, control, amsterdam, gut wall, blood serum, the netherlands, human adult stage)2025-10-15v41 / 149pendingNo
1151naFecal samples from individuals aged 70 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human aged stage, 70-year-old human stage)2025-10-15v41 / 156pendingNo
1151naFecal samples from individuals with BMI 21 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage)2025-10-15v41 / 160pendingNo
1151naFecal samples from individuals aged 68 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human aged stage, 68-year-old human stage)2025-10-15v41 / 165pendingNo
1151naFecal samples from individuals aged 51 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human middle aged stage, 51-year-old human stage)2025-10-15v41 / 166pendingNo
1151naFecal samples from individuals with BMI 24 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human adult stage)2025-10-15v41 / 182pendingNo
1151naFecal samples from individuals aged 67 (common feces, homo sapiens, amsterdam, gut wall, the netherlands, human aged stage, 67-year-old human stage)2025-10-15v41 / 191pendingNo

Problems / suggestions? Please visit the dbBact forum