Experiment ID: 1145

Field Description
namegut-microbiota-based ensemble model predicts prognosis of pediatric inflammatory bowel disease (11650326)
proj_id11650326
sraprjna917086
doi10.1016/j.isci.2024.111442

Annotations for experiment:

term enrichment score
TermScore
seoul0.250000
inflammatory bowel disease0.094340
irritable bowel syndrome0.093023
adolescent stage0.076923
LOWER IN irritable bowel syndrome0.062500
south korea0.052632
ileum0.050000
ulcerative colitis0.043478
colon0.042781
crohn's disease0.041667
LOWER IN control0.004502
control0.004353
homo sapiens0.002591
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
seoul0.142857
LOWER IN irritable bowel syndrome0.090909
irritable bowel syndrome0.090909
inflammatory bowel disease0.058824
adolescent stage0.040000
ileum0.027027
south korea0.027027
ulcerative colitis0.023256
colon0.022222
crohn's disease0.022222
LOWER IN control0.002278
control0.002227
homo sapiens0.001297
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
adolescent stage1.000000
south korea1.000000
seoul1.000000
homo sapiens1.000000
colon0.571429
ileum0.333333
ulcerative colitis0.333333
crohn's disease0.333333
inflammatory bowel disease0.238095
LOWER IN control0.190476
tumor necrosis factor-alpha0.142857
control0.095238
irritable bowel syndrome0.095238
LOWER IN irritable bowel syndrome0.047619
Number of experiments associating the term to the sequence
TermScore
colon1.000000
ileum1.000000
ulcerative colitis1.000000
crohn's disease1.000000
LOWER IN control1.000000
feces1.000000
adolescent stage1.000000
south korea1.000000
seoul1.000000
homo sapiens1.000000
control1.000000
LOWER IN irritable bowel syndrome1.000000
irritable bowel syndrome1.000000
inflammatory bowel disease1.000000
tumor necrosis factor-alpha1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1145naUC (all disease states) vs Healthy Controls ( high in colon ulcerative colitis compared to control in feces adolescent stage south korea seoul homo sapiens )2025-10-15v31 / 12pendingNo
1145naUC Active (dominant colon, feces, ulcerative colitis, adolescent stage, south korea, seoul, homo sapiens)2025-10-15v31 / 16pendingNo
1145naFunctional Gastrointestinal Disorders (FGID) (dominant feces, irritable bowel syndrome, adolescent stage, south korea, seoul, homo sapiens)2025-10-15v31 / 18pendingNo
1145naPatients on Anti-TNF alpha therapy (dominant feces, inflammatory bowel disease, adolescent stage, south korea, seoul, tumor necrosis factor-alpha, homo sapiens)2025-10-15v31 / 19pendingNo
1145naHealthy Controls (dominant feces, adolescent stage, south korea, seoul, homo sapiens, control)2025-10-15v31 / 20pendingNo
1145naUC Remission (dominant colon, feces, ulcerative colitis, adolescent stage, south korea, seoul, homo sapiens)2025-10-15v31 / 21pendingNo
1145naCD Remission (dominant colon, ileum, feces, crohn's disease, adolescent stage, south korea, seoul, homo sapiens)2025-10-15v31 / 24pendingNo
1145naCalprotectin > 2000 (dominant feces, inflammatory bowel disease, adolescent stage, south korea, seoul, homo sapiens)2025-10-15v31 / 26pendingNo
1145naCD Active (common colon, ileum, feces, crohn's disease, adolescent stage, south korea, seoul, homo sapiens)2025-10-15v31 / 28pendingNo
1145naCD Active (dominant colon, ileum, feces, crohn's disease, adolescent stage, south korea, seoul, homo sapiens)2025-10-15v31 / 28pendingNo
1145naCD Remission (common colon, ileum, feces, crohn's disease, adolescent stage, south korea, seoul, homo sapiens)2025-10-15v31 / 32pendingNo
1145naUC Active (common colon, feces, ulcerative colitis, adolescent stage, south korea, seoul, homo sapiens)2025-10-15v31 / 33pendingNo
1145naPatients on Anti-TNF alpha therapy (common feces, inflammatory bowel disease, adolescent stage, south korea, seoul, tumor necrosis factor-alpha, homo sapiens)2025-10-15v31 / 36pendingNo
1145naPatients on Anti-TNF alpha therapy vs Healthy Controls ( high in inflammatory bowel disease tumor necrosis factor-alpha compared to control in feces adolescent stage south korea seoul homo sapiens )2025-10-15v31 / 36pendingNo
1145naCalprotectin > 2000 (common feces, inflammatory bowel disease, adolescent stage, south korea, seoul, homo sapiens)2025-10-15v31 / 43pendingNo
1145naUC Remission (common colon, feces, ulcerative colitis, adolescent stage, south korea, seoul, homo sapiens)2025-10-15v31 / 47pendingNo
1145naFunctional Gastrointestinal Disorders (FGID) (common feces, irritable bowel syndrome, adolescent stage, south korea, seoul, homo sapiens)2025-10-15v31 / 51pendingNo
1145naIBD (CD & UC, all disease states) vs FGID ( high in colon ileum ulcerative colitis crohn's disease compared to irritable bowel syndrome in feces adolescent stage south korea seoul homo sapiens )2025-10-15v31 / 53pendingNo
1145naHealthy Controls (common feces, adolescent stage, south korea, seoul, homo sapiens, control)2025-10-15v31 / 61pendingNo
1145naCD (all disease states) vs Healthy Controls ( high in colon ileum crohn's disease compared to control in feces adolescent stage south korea seoul homo sapiens )2025-10-15v31 / 113pendingNo
1145naIBD (CD & UC, all disease states) vs Healthy Controls ( high in colon ileum ulcerative colitis crohn's disease compared to control in feces adolescent stage south korea seoul homo sapiens )2025-10-15v31 / 115pendingNo

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