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Experiment ID: 1108

Field	Description
name	microbial dynamics in newly diagnosed and treatment naïve ibd patients in the mediterranean
sra	prjeb47162
sra	prjeb47161
sra	https://doi.org/10.1093/ibd/izad004
datamd5	fdcc4be8aef6a6518ee41eb5c67ce6cb
mapmd5	cd4bebcf3eaa709e9fe92d59af1356a7

Annotations for experiment:

term enrichment score

Term	Score
malta	0.500000
LOWER IN inflammatory bowel disease	0.117647
inflammatory bowel disease	0.117647
ulcerative colitis	0.081081
crohn's disease	0.077922
LOWER IN crohn's disease	0.071429
LOWER IN ulcerative colitis	0.068966
human adult stage	0.046512
control	0.008863
LOWER IN control	0.008850
adult	0.008163
homo sapiens	0.005236
feces	0.004587

Fraction of dbbact annotations with this term covered by the query

Term	Score
malta	0.333333
LOWER IN inflammatory bowel disease	0.111111
inflammatory bowel disease	0.111111
LOWER IN crohn's disease	0.050000
LOWER IN ulcerative colitis	0.047619
ulcerative colitis	0.045455
crohn's disease	0.043478
human adult stage	0.023810
LOWER IN control	0.004587
control	0.004484
adult	0.004098
homo sapiens	0.002625
feces	0.002299

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
adult	1.000000
malta	1.000000
human adult stage	1.000000
control	0.375000
ulcerative colitis	0.375000
crohn's disease	0.375000
LOWER IN inflammatory bowel disease	0.125000
LOWER IN crohn's disease	0.125000
LOWER IN ulcerative colitis	0.125000
inflammatory bowel disease	0.125000
LOWER IN control	0.125000

Number of experiments associating the term to the sequence

Term	Score
control	1.000000
LOWER IN inflammatory bowel disease	1.000000
LOWER IN crohn's disease	1.000000
LOWER IN ulcerative colitis	1.000000
feces	1.000000
homo sapiens	1.000000
adult	1.000000
malta	1.000000
human adult stage	1.000000
ulcerative colitis	1.000000
crohn's disease	1.000000
inflammatory bowel disease	1.000000
LOWER IN control	1.000000

Search:

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
1108	amnon	dominant feces, homo sapiens, control, adult, malta, human adult stage	2024-10-26	v1	1 / 16	pending	No
1108	amnon	dominant feces, homo sapiens, adult, ulcerative colitis, malta, human adult stage	2024-10-26	v1	1 / 18	pending	No
1108	amnon	dominant feces, homo sapiens, adult, crohn's disease, malta, human adult stage	2024-10-26	v1	1 / 22	pending	No
1108	amnon	high in inflammatory bowel disease crohn's disease ulcerative colitis compared to control in feces homo sapiens adult malta human adult stage	2024-10-26	v1	1 / 44	pending	No
1108	amnon	common feces, homo sapiens, adult, crohn's disease, malta, human adult stage	2024-10-26	v1	1 / 45	pending	No
1108	amnon	common feces, homo sapiens, adult, ulcerative colitis, malta, human adult stage	2024-10-26	v1	1 / 56	pending	No
1108	amnon	common feces, homo sapiens, control, adult, malta, human adult stage	2024-10-26	v1	1 / 109	pending	No
1108	amnon	high in control compared to inflammatory bowel disease crohn's disease ulcerative colitis in feces homo sapiens adult malta human adult stage	2024-10-26	v1	1 / 217	pending	No

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