dbBact

This is the development server

Experiment ID: 1056

Field	Description
name	gut microbiome and dietary patterns in different saudi populations and monkeys
sra	prjeb9815
doi	https://doi.org/10.1038/srep32191
datamd5	16cd697fa4241136db21a76ec891592f
mapmd5	42a211d147a9f58a3c95745155f99c5c

Annotations for experiment:

term enrichment score

Term	Score
human garbage diet	0.500000
saudi arabia	0.500000
bedouin	0.500000
baboon	0.400000
makkah province	0.400000
papio anubis	0.285714
LOWER IN homo sapiens	0.250000
LOWER IN bedouin	0.250000
LOWER IN monkey	0.250000
LOWER IN baboon	0.250000
LOWER IN human garbage diet	0.250000
LOWER IN papio anubis	0.222222
monkey	0.100000
human adult stage	0.043478
adult	0.008065
homo sapiens	0.005155
feces	0.004577

Fraction of dbbact annotations with this term covered by the query

Term	Score
human garbage diet	0.500000
LOWER IN homo sapiens	0.500000
LOWER IN bedouin	0.500000
bedouin	0.500000
LOWER IN monkey	0.500000
LOWER IN baboon	0.500000
LOWER IN human garbage diet	0.500000
makkah province	0.500000
baboon	0.333333
saudi arabia	0.333333
LOWER IN papio anubis	0.333333
papio anubis	0.200000
monkey	0.055556
human adult stage	0.023256
adult	0.004082
homo sapiens	0.002591
feces	0.002294

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
saudi arabia	1.000000
papio anubis	0.500000
monkey	0.500000
baboon	0.500000
human garbage diet	0.500000
homo sapiens	0.500000
bedouin	0.500000
makkah province	0.333333
adult	0.333333
human adult stage	0.333333
LOWER IN homo sapiens	0.166667
LOWER IN bedouin	0.166667
LOWER IN papio anubis	0.166667
LOWER IN monkey	0.166667
LOWER IN baboon	0.166667
LOWER IN human garbage diet	0.166667

Number of experiments associating the term to the sequence

Term	Score
papio anubis	1.000000
monkey	1.000000
baboon	1.000000
human garbage diet	1.000000
LOWER IN homo sapiens	1.000000
LOWER IN bedouin	1.000000
feces	1.000000
saudi arabia	1.000000
homo sapiens	1.000000
bedouin	1.000000
LOWER IN papio anubis	1.000000
LOWER IN monkey	1.000000
LOWER IN baboon	1.000000
LOWER IN human garbage diet	1.000000
makkah province	1.000000
adult	1.000000
human adult stage	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
1056	amnon	dominant feces, papio anubis, monkey, baboon, saudi arabia, makkah province, human garbage diet	2023-09-25	v3	1 / 17	pending	No
1056	amnon	dominant feces, homo sapiens, adult, saudi arabia, human adult stage, bedouin	2023-09-25	v3	1 / 20	pending	No
1056	amnon	common feces, homo sapiens, adult, saudi arabia, human adult stage, bedouin	2023-09-25	v3	1 / 67	pending	No
1056	amnon	common feces, papio anubis, monkey, baboon, saudi arabia, makkah province, human garbage diet	2023-09-25	v3	1 / 141	pending	No
1056	amnon	high in homo sapiens bedouin compared to papio anubis monkey baboon human garbage diet in feces saudi arabia	2023-09-25	v3	1 / 203	pending	No
1056	amnon	high in papio anubis monkey baboon human garbage diet compared to homo sapiens bedouin in feces saudi arabia	2023-09-25	v3	1 / 506	pending	No

Problems / suggestions? Please visit the dbBact forum