Experiment ID: 1006

Field Description
namehost genetics and environment shape the composition of the gastrointestinal microbiome in nonhuman primates
sraprjna772263
doihttps://doi.org/10.1128/spectrum.02139-22
datamd5f919d5f31a726925c7c16905fb42f6ac
mapmd55d429ae6c45775bfc5c24e74871e4daf

Annotations for experiment:

term enrichment score
TermScore
bethesda0.500000
pig tailed macaque monkey0.285714
sabaeus monkey0.285714
chlorocebus pygerythrus0.285714
state of maryland0.250000
macaca nemestrina0.222222
rhesus macaque0.222222
chlorocebus sabaeus0.222222
vervet monkey0.181818
macaca mulatta0.105263
monkey0.055556
captive0.031250
research facility0.005236
united states of america0.003333
feces0.002294
Fraction of dbbact annotations with this term covered by the query
TermScore
bethesda0.333333
pig tailed macaque monkey0.333333
sabaeus monkey0.333333
chlorocebus pygerythrus0.333333
macaca nemestrina0.200000
rhesus macaque0.200000
chlorocebus sabaeus0.200000
state of maryland0.142857
vervet monkey0.142857
macaca mulatta0.066667
monkey0.028571
captive0.015873
research facility0.002625
united states of america0.001669
feces0.001148
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
monkey1.000000
captive1.000000
united states of america1.000000
state of maryland1.000000
research facility1.000000
bethesda1.000000
macaca nemestrina0.250000
pig tailed macaque monkey0.250000
macaca mulatta0.250000
rhesus macaque0.250000
chlorocebus sabaeus0.250000
sabaeus monkey0.250000
chlorocebus pygerythrus0.250000
vervet monkey0.250000
Number of experiments associating the term to the sequence
TermScore
feces1.000000
monkey1.000000
captive1.000000
united states of america1.000000
state of maryland1.000000
research facility1.000000
bethesda1.000000
macaca nemestrina1.000000
pig tailed macaque monkey1.000000
macaca mulatta1.000000
rhesus macaque1.000000
chlorocebus sabaeus1.000000
sabaeus monkey1.000000
chlorocebus pygerythrus1.000000
vervet monkey1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1006amnondominant rhesus macaque, macaca mulatta, bethesda, research facility, state of maryland, united states of america, captive, monkey, feces2023-01-09v41 / 9approvedNo
1006amnondominant bethesda, research facility, state of maryland, united states of america, captive, vervet monkey, chlorocebus pygerythrus, monkey, feces2023-01-08v41 / 12approvedNo
1006amnondominant pig tailed macaque monkey, macaca nemestrina, bethesda, research facility, state of maryland, united states of america, captive, monkey, feces2023-01-08v41 / 13approvedNo
1006amnondominant sabaeus monkey, chlorocebus sabaeus, bethesda, research facility, state of maryland, united states of america, captive, monkey, feces2023-01-08v41 / 18approvedNo
1006amnoncommon feces, monkey, chlorocebus pygerythrus, vervet monkey, captive, united states of america, state of maryland, research facility, bethesda2023-01-08v41 / 222approvedNo
1006amnoncommon feces, monkey, captive, united states of america, state of maryland, research facility, bethesda, chlorocebus sabaeus, sabaeus monkey2023-01-08v41 / 282approvedNo
1006amnoncommon feces, monkey, captive, united states of america, state of maryland, research facility, bethesda, macaca mulatta, rhesus macaque2023-01-09v41 / 318approvedNo
1006amnoncommon feces, monkey, captive, united states of america, state of maryland, research facility, bethesda, macaca nemestrina, pig tailed macaque monkey2023-01-08v41 / 514approvedNo

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