dbBact

This is the development server

Experiment ID: 10

Field	Description
name	gem
name	association of host genome with intestinal microbial composition in a large healthy cohort
sra	erp016515
sra	prjeb14839
datamd5	bb9ca8a781727e3a084ec7a9d835ee7e
mapmd5	46645595f8cb350d63b190f17b95f0a8

Annotations for experiment:

term enrichment score

Term	Score
toronto	0.500000
LOWER IN child	0.095238
LOWER IN adult	0.064516
LOWER IN male	0.062500
LOWER IN female	0.057143
male	0.035714
child	0.029412
female	0.023256
adult	0.007968
homo sapiens	0.005168
feces	0.004577

Fraction of dbbact annotations with this term covered by the query

Term	Score
toronto	0.333333
LOWER IN child	0.066667
LOWER IN adult	0.040000
LOWER IN male	0.038462
LOWER IN female	0.034483
male	0.020000
child	0.016129
female	0.012500
adult	0.004082
homo sapiens	0.002591
feces	0.002294

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
toronto	1.000000
adult	0.166667
LOWER IN child	0.166667
child	0.166667
LOWER IN adult	0.166667
male	0.166667
LOWER IN female	0.166667
female	0.166667
LOWER IN male	0.166667

Number of experiments associating the term to the sequence

Term	Score
adult	1.000000
LOWER IN child	1.000000
feces	1.000000
homo sapiens	1.000000
toronto	1.000000
child	1.000000
LOWER IN adult	1.000000
male	1.000000
LOWER IN female	1.000000
female	1.000000
LOWER IN male	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
10	amnon	high in female compared to male in feces homo sapiens toronto	2016-10-27	v4	1 / 10	approved	No
10	amnon	high in male compared to female in feces homo sapiens toronto	2016-10-27	v4	1 / 11	approved	No
10	amnon	dominant feces, homo sapiens, toronto	2016-10-27	v4	1 / 23	approved	No
10	amnon	negatively correlated with age (6-35) ( high in child compared to adult in feces homo sapiens toronto )	2016-10-27	v4	1 / 125	approved	No
10	amnon	common feces, homo sapiens, toronto	2016-10-27	v4	1 / 138	approved	No
10	amnon	positively correlated with age (6-35) ( high in adult compared to child in feces homo sapiens toronto )	2016-10-27	v4	1 / 228	approved	No

Problems / suggestions? Please visit the dbBact forum